Miyakogusa Predicted Gene
- Lj1g3v3019860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3019860.1 Non Chatacterized Hit- tr|K3ZLH7|K3ZLH7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si027436,37.23,1e-18,EF_hand_5,NULL; EF_HAND_2,EF-HAND 2;
CALCIUM-BINDING EF HAND FAMILY PROTEIN,NULL; EF-HAND
CALCIUM-BI,CUFF.29861.1
(583 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68185 weakly similar to UniRef100_A7PMY0 Cluster: Chr... 1055 0.0
gnl|LJGI|BP065260 similar to UniRef100_Q4SHC9 Cluster: Chromosom... 511 e-144
gnl|LJGI|TC58349 weakly similar to UniRef100_A7PMY0 Cluster: Chr... 248 3e-65
>gnl|LJGI|TC68185 weakly similar to UniRef100_A7PMY0 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 618
Score = 1055 bits (532), Expect = 0.0
Identities = 546/553 (98%)
Strand = Plus / Plus
Query: 1 atggctcttcatcattttgactaccttattgcaaaggagcaaacatcacagagtgatact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 atggctcttcatcattttgactaccttattgcaaaggagcaaacatcacagagtgatact 125
Query: 61 agcagctcaaattctcccttgtttggtttgatagatcttttcctatactgcacaattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 agcagctcaaattctcccttgtttggtttgatagatcttttcctatactgcacaattttc 185
Query: 121 aacaaaatcctcaagttcttctcaaatttctggtgtagtaactcagaggtaaggggagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aacaaaatcctcaagttcttctcaaatttctggtgtagtaactcagaggtaaggggagag 245
Query: 181 gagaaggtttcagattatgagtttaaccaccaagaaaatgagtcaaaaagtgaggggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gagaaggtttcagattatgagtttaaccaccaagaaaatgagtcaaaaagtgaggggatt 305
Query: 241 cagagggatgaggtaaaaaaggtgatggcagaactgggannnnnnngcagcaaagaaagt 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 306 cagagggatgaggtaaaaaaggtgatggcagaactgggatttttttgcagcaaagaaagt 365
Query: 301 gaggaacttgaagaaaagtatggttccaaggagctttctgaactgtttgaggaccaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaggaacttgaagaaaagtatggttccaaggagctttctgaactgtttgaggaccaggag 425
Query: 361 cccagcttggaggaggtgaagcaggcttttgatgtttttgatgagaacagagatgggttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cccagcttggaggaggtgaagcaggcttttgatgtttttgatgagaacagagatgggttt 485
Query: 421 attgatgcaagggaactgcatagagttctctgtgttttgggattgaaggaagaagcaggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 attgatgcaagggaactgcatagagttctctgtgttttgggattgaaggaagaagcaggc 545
Query: 481 atcgagaaatgcaagataatgatcagaaactttgataagaatcaagatggaagaattgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 atcgagaaatgcaagataatgatcagaaactttgataagaatcaagatggaagaattgat 605
Query: 541 ttcattgagtttg 553
|||||||||||||
Sbjct: 606 ttcattgagtttg 618
>gnl|LJGI|BP065260 similar to UniRef100_Q4SHC9 Cluster: Chromosome 5 SCAF14581, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome 5 SCAF14581, whole genome
shotgun sequence - Tetraodon nigroviridis (Green
puffer), partial (6%)
Length = 446
Score = 511 bits (258), Expect = e-144
Identities = 363/394 (92%), Gaps = 5/394 (1%)
Strand = Plus / Minus
Query: 195 ttatgagtttaaccacc-aagaaaatgagtcaaaaagtgaggggattcagagggatgagg 253
|||||||||||||| || |||||||||| || ||||||||||||||||||||||||||||
Sbjct: 446 ttatgagtttaaccccccaagaaaatgactccaaaagtgaggggattcagagggatgagg 387
Query: 254 taaaaaaggtgatggcagaactgggannnnnnngcagcaaagaaagtgaggaacttgaag 313
|||||||||||||| ||||||||||| || || |||||||||||||||||||||
Sbjct: 386 taaaaaaggtgatgccagaactgggatttttttgccgccaagaaagtgaggaacttgaag 327
Query: 314 aaaagtatggttccaaggagctttctgaactgtttgaggaccaggagcccagcttggagg 373
|||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 326 aaaagtatggttcccaggagctttctgaactgtttgaggacccggagccccgcttggagg 267
Query: 374 aggtgaagc-aggcttttgatgtttttg-atgagaacagagatgggttt-attgatgc-a 429
||||| | ||||||||||| |||||| |||||||||||||||||||| |||||||| |
Sbjct: 266 gagtgaanccaggcttttgatatttttggatgagaacagagatgggttttattgatgcca 207
Query: 430 agggaactgcatagagttctctgtgttttgggattgaaggaagaagcaggcatcgagaaa 489
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 206 agggaactgcatagagttctctgtgttttgggattgaaggaagaacccggcatcgagaaa 147
Query: 490 tgcaagataatgatcagaaactttgataagaatcaagatggaagaattgatttcattgag 549
||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 146 tgccagataatgatccgaaactttgataagaatccagatggaagaattgatttccttgag 87
Query: 550 tttgtaaaaattatggaaaatcgattctgctgat 583
||||||||||||||||||||||||||||||||||
Sbjct: 86 tttgtaaaaattatggaaaatcgattctgctgat 53
>gnl|LJGI|TC58349 weakly similar to UniRef100_A7PMY0 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 838
Score = 248 bits (125), Expect = 3e-65
Identities = 248/289 (85%)
Strand = Plus / Plus
Query: 294 agaaagtgaggaacttgaagaaaagtatggttccaaggagctttctgaactgtttgagga 353
||||||||||||||| | ||||| ||||||||||| ||| |||| ||| ||||||||||
Sbjct: 458 agaaagtgaggaactgaatgaaaattatggttccaatgagatttcagaattgtttgagga 517
Query: 354 ccaggagcccagcttggaggaggtgaagcaggcttttgatgtttttgatgagaacagaga 413
|||||||| || |||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 518 tcaggagccaagtgtggaggagttgaagaaggcttttgatgtgtttgatgagaacagaga 577
Query: 414 tgggtttattgatgcaagggaactgcatagagttctctgtgttttgggattgaaggaaga 473
||||||||||||||| | ||| ||||| || ||||||| |||||||||||| |||||||
Sbjct: 578 tgggtttattgatgccaaggagctgcagagcgttctctctgttttgggattcaaggaagc 637
Query: 474 agcaggcatcgagaaatgcaagataatgatcagaaactttgataagaatcaagatggaag 533
||||| || ||| | ||| |||| ||||||| || |||||| | ||||||||||| ||
Sbjct: 638 agcagaaattgaggactgccagattatgatcaagaaatttgatgaaaatcaagatgggag 697
Query: 534 aattgatttcattgagtttgtaaaaattatggaaaatcgattctgctga 582
||||||||| |||||||||| |||||||||| ||||| | |||||||||
Sbjct: 698 aattgatttgattgagtttgaaaaaattatgcaaaatagcttctgctga 746