Miyakogusa Predicted Gene
- Lj1g3v3006720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3006720.1 Non Chatacterized Hit- tr|K4B739|K4B739_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.73,3e-18,U1-like zinc finger,Zinc finger, U1-type; zinc
finger,Zinc finger, C2H2-like; ZINC FINGER PROTEIN-RE,CUFF.29853.1
(999 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70569 weakly similar to UniRef100_A7PN35 Cluster: Chr... 912 0.0
gnl|LJGI|TC73660 homologue to UniRef100_Q6NRE3 Cluster: MGC83886... 505 e-142
gnl|LJGI|FS342835 weakly similar to UniRef100_A8J1N3 Cluster: Ce... 500 e-141
gnl|LJGI|BP043432 weakly similar to UniRef100_A7PN35 Cluster: Ch... 226 2e-58
>gnl|LJGI|TC70569 weakly similar to UniRef100_A7PN35 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (58%)
Length = 652
Score = 912 bits (460), Expect = 0.0
Identities = 463/464 (99%)
Strand = Plus / Plus
Query: 536 atggaaaatggaagaaatacccaaagaaacctaaaatgaagactgtgcaacctgcatatt 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggaaaatggaagaaatacccaaagaaacctaaaatgaagactgtgcaacctgcatatt 60
Query: 596 gtgaagtttgcaagacagagtgcaccagcaaggatgtactggaccagcataaattaggaa 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgaagtttgcaagacagagtgcaccagcaaggatgtactggaccagcataaattaggaa 120
Query: 656 agaggcacaaaaagaacttggagaaactaagagaatcattaaaaccagcccaagttcatc 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaggcacaaaaagaacttggagaaactaagagaatcattaaaaccagcccaagttcatc 180
Query: 716 catctgggtcgtctaatcctgttataggaccacgagaacagaacgacaagggaaaatcta 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catctgggtcgtctaatcctgttataggaccacgagaacagaacgacaagggaaaatcta 240
Query: 776 tcagtaagcttaagagtaagaggaaaattgaaactccagaggatttggagattaagaaaa 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcagtaagcttaagagtaagaggaaaattgaaactccagaggatttggagattaagaaaa 300
Query: 836 agaaggttcttgaaggaggggctgcagctaatgcagttagaacctgtgctgtatgtaatg 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaggttcttgaaggaggggctgcagctaatgcagttagaacctgtgctgtatgtaatg 360
Query: 896 tggtgtgtaatagtgagacagtttataattatcatattgcaggaaaaatgcatgctgcta 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggtgtgtaatagtgagacagtttataattatcatattgcaggaaaaatgcatgctgcta 420
Query: 956 tgatgaagaaagcatctggccttagacaacccaatgctagttaa 999
|||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 421 tgatgaagaaagcatctggccttagacaaccctatgctagttaa 464
>gnl|LJGI|TC73660 homologue to UniRef100_Q6NRE3 Cluster: MGC83886 protein; n=1;
Xenopus laevis|Rep: MGC83886 protein - Xenopus laevis
(African clawed frog), partial (4%)
Length = 583
Score = 505 bits (255), Expect = e-142
Identities = 255/255 (100%)
Strand = Plus / Plus
Query: 124 tcaacatcttaccctacccattacccctattaccctcaaaaccctaaccctgctgccact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcaacatcttaccctacccattacccctattaccctcaaaaccctaaccctgctgccact 388
Query: 184 gttgtagaacctgtgctcaaccctcctggtgttgattcctatgccccattgaattccaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gttgtagaacctgtgctcaaccctcctggtgttgattcctatgccccattgaattccaac 448
Query: 244 ccagtttcccatctgggttatgaacccattcccattcccaatcccaatttgccgtacggt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ccagtttcccatctgggttatgaacccattcccattcccaatcccaatttgccgtacggt 508
Query: 304 caaggccacgttgtagattcgaatgcgagctcgttggtgccgccgtcttatgggtactac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 caaggccacgttgtagattcgaatgcgagctcgttggtgccgccgtcttatgggtactac 568
Query: 364 tatgaccccaatgct 378
|||||||||||||||
Sbjct: 569 tatgaccccaatgct 583
Score = 182 bits (92), Expect = 3e-45
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 atggaaccaccacccatggactccaccaccactgtcacatggcctgattatcatcaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atggaaccaccacccatggactccaccaccactgtcacatggcctgattatcatcaaacc 271
Query: 61 caaaccctaaacacagtactcccatcaccata 92
||||||||||||||||||||||||||||||||
Sbjct: 272 caaaccctaaacacagtactcccatcaccata 303
>gnl|LJGI|FS342835 weakly similar to UniRef100_A8J1N3 Cluster: Cell wall protein
pherophorin-C10; n=1; Chlamydomonas reinhardtii|Rep:
Cell wall protein pherophorin-C10 - Chlamydomonas
reinhardtii, partial (6%)
Length = 642
Score = 500 bits (252), Expect = e-141
Identities = 255/256 (99%)
Strand = Plus / Plus
Query: 124 tcaacatcttaccctacccattacccctattaccctcaaaaccctaaccctgctgccact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcaacatcttaccctacccattacccctattaccctcaaaaccctaaccctgctgccact 446
Query: 184 gttgtagaacctgtgctcaaccctcctggtgttgattcctatgccccattgaattccaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gttgtagaacctgtgctcaaccctcctggtgttgattcctatgccccattgaattccaac 506
Query: 244 ccagtttcccatctgggttatgaacccattcccattcccaatcccaatttgccgtacggt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ccagtttcccatctgggttatgaacccattcccattcccaatcccaatttgccgtacggt 566
Query: 304 caaggccacgttgtagattcgaatgcgagctcgttggtgccgccgtcttatgggtactac 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 caaggccacgttgtatattcgaatgcgagctcgttggtgccgccgtcttatgggtactac 626
Query: 364 tatgaccccaatgctc 379
||||||||||||||||
Sbjct: 627 tatgaccccaatgctc 642
Score = 182 bits (92), Expect = 3e-45
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 atggaaccaccacccatggactccaccaccactgtcacatggcctgattatcatcaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atggaaccaccacccatggactccaccaccactgtcacatggcctgattatcatcaaacc 323
Query: 61 caaaccctaaacacagtactcccatcaccata 92
||||||||||||||||||||||||||||||||
Sbjct: 324 caaaccctaaacacagtactcccatcaccata 355
>gnl|LJGI|BP043432 weakly similar to UniRef100_A7PN35 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (32%)
Length = 487
Score = 226 bits (114), Expect = 2e-58
Identities = 230/268 (85%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 704 cccaagttcatccatctgggtcgtctaatcctgttataggaccacga---gaacagaacg 760
||||||||||||| |||||||| |||| ||||| ||||||||||| | ||||||||||
Sbjct: 430 cccaagttcatccctctgggtcatctagtcctgctataggaccaccacaagaacagaacg 371
Query: 761 acaagggaaaatctatcagtaagcttaagagtaagaggaaaattgaaactccagaggatt 820
|| |||| ||||||||| || || ||||| |||||||||| |||||||||||||||||
Sbjct: 370 acgagggcaaatctatcggtgggcataagaaaaagaggaaaaatgaaactccagaggatt 311
Query: 821 tggagattaagaaaaagaaggttcttgaaggaggggctgcagctaatgcagttagaacct 880
|||||| |||||||||||| || ||||| | ||| | | |||| ||||||||||||| |
Sbjct: 310 tggagaggaagaaaaagaagcttattgaatgcgggacagtagctgatgcagttagaacat 251
Query: 881 gtgctgtatgtaatgtggtgtgtaatagtgagacagtttataattatcatattgcaggaa 940
||| | ||||||||||||||||||||| |||| |||||||||| |||||| |||||||||
Sbjct: 250 gtgatatatgtaatgtggtgtgtaataatgagtcagtttataaatatcatcttgcaggaa 191
Query: 941 aaatgcatgctgctatgatgaagaaagc 968
||| ||||| |||||| ||||||||||
Sbjct: 190 aaaagcatgtggctatggtgaagaaagc 163