Miyakogusa Predicted Gene
- Lj1g3v3006710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3006710.1 Non Chatacterized Hit- tr|A5B0X8|A5B0X8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.07,1e-18,C2H2 and C2HC zinc fingers,NULL;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; U1-like zinc finger,Zinc
fing,CUFF.29852.1
(1107 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043432 weakly similar to UniRef100_A7PN35 Cluster: Ch... 690 0.0
gnl|LJGI|AW719969 similar to UniRef100_A7PN32 Cluster: Chromosom... 377 e-103
gnl|LJGI|TC70569 weakly similar to UniRef100_A7PN35 Cluster: Chr... 226 2e-58
gnl|LJGI|TC74003 similar to UniRef100_A8E1F9 Cluster: M34 protei... 180 1e-44
gnl|LJGI|FS342835 weakly similar to UniRef100_A8J1N3 Cluster: Ce... 56 5e-07
gnl|LJGI|TC73660 homologue to UniRef100_Q6NRE3 Cluster: MGC83886... 56 5e-07
>gnl|LJGI|BP043432 weakly similar to UniRef100_A7PN35 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (32%)
Length = 487
Score = 690 bits (348), Expect = 0.0
Identities = 354/356 (99%)
Strand = Plus / Minus
Query: 752 taacccaagatcatccctctgggtcgtctaatcctgctatcgagttggagaaactaaccc 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 taacccaagatcatccctctgggtcgtctaatcctgctatcgagttggagaaactaaccc 428
Query: 812 aagttcatccctctgggtcatctagtcctgctataggaccacaacaagaacagaacgacg 871
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 427 aagttcatccctctgggtcatctagtcctgctataggaccaccacaagaacagaacgacg 368
Query: 872 agggcaaatctatcggtgggcataagaaaaagaggaaaaatgaaactccagaggatttgg 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agggcaaatctatcggtgggcataagaaaaagaggaaaaatgaaactccagaggatttgg 308
Query: 932 agaggaagaaaaagaagcttattgaatgcgggacagtagctgatgcagttagaacatgtg 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agaggaagaaaaagaagcttattgaatgcgggacagtagctgatgcagttagaacatgtg 248
Query: 992 atatatgtaatgtggtgtgtaataatgagtcagtttataaatatcatcttgcaggaaaaa 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atatatgtaatgtggtgtgtaataatgagtcagtttataaatatcatcttgcaggaaaaa 188
Query: 1052 agcatgtggctatggtgaagaaagcttcagaccttggacaaggcaatggcagttaa 1107
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 187 agcatgtggctatggtgaagaaagcttcagaccttggacaaggccatggcagttaa 132
Score = 75.8 bits (38), Expect = 5e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 742 ttggagaaactaacccaagatcatccctctgggtcgtctaatcctgctat 791
||||||||||||||||||| ||||||||||||||| |||| |||||||||
Sbjct: 443 ttggagaaactaacccaagttcatccctctgggtcatctagtcctgctat 394
>gnl|LJGI|AW719969 similar to UniRef100_A7PN32 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 263
Score = 377 bits (190), Expect = e-103
Identities = 190/190 (100%)
Strand = Plus / Plus
Query: 77 tctccaccctcctccaccgcgtcgaagccctcgaatcctccctcaacctccacacacacc 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tctccaccctcctccaccgcgtcgaagccctcgaatcctccctcaacctccacacacacc 133
Query: 137 aacctctccgccacgccgccgcacgcgtgatccaaacccgctttcgctccctcctcgttc 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aacctctccgccacgccgccgcacgcgtgatccaaacccgctttcgctccctcctcgttc 193
Query: 197 gcagatcaagaaccctcagccatctcacttcctcaaattctctcaaaccctcttcttcca 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gcagatcaagaaccctcagccatctcacttcctcaaattctctcaaaccctcttcttcca 253
Query: 257 gccaccccca 266
||||||||||
Sbjct: 254 gccaccccca 263
>gnl|LJGI|TC70569 weakly similar to UniRef100_A7PN35 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (58%)
Length = 652
Score = 226 bits (114), Expect = 2e-58
Identities = 230/268 (85%), Gaps = 3/268 (1%)
Strand = Plus / Plus
Query: 809 cccaagttcatccctctgggtcatctagtcctgctataggaccacaacaagaacagaacg 868
||||||||||||| |||||||| |||| ||||| ||||||||||| | ||||||||||
Sbjct: 169 cccaagttcatccatctgggtcgtctaatcctgttataggaccacga---gaacagaacg 225
Query: 869 acgagggcaaatctatcggtgggcataagaaaaagaggaaaaatgaaactccagaggatt 928
|| |||| ||||||||| || || ||||| |||||||||| |||||||||||||||||
Sbjct: 226 acaagggaaaatctatcagtaagcttaagagtaagaggaaaattgaaactccagaggatt 285
Query: 929 tggagaggaagaaaaagaagcttattgaatgcgggacagtagctgatgcagttagaacat 988
|||||| |||||||||||| || ||||| | ||| | | |||| ||||||||||||| |
Sbjct: 286 tggagattaagaaaaagaaggttcttgaaggaggggctgcagctaatgcagttagaacct 345
Query: 989 gtgatatatgtaatgtggtgtgtaataatgagtcagtttataaatatcatcttgcaggaa 1048
||| | ||||||||||||||||||||| |||| |||||||||| |||||| |||||||||
Sbjct: 346 gtgctgtatgtaatgtggtgtgtaatagtgagacagtttataattatcatattgcaggaa 405
Query: 1049 aaaagcatgtggctatggtgaagaaagc 1076
||| ||||| |||||| ||||||||||
Sbjct: 406 aaatgcatgctgctatgatgaagaaagc 433
Score = 95.6 bits (48), Expect = 6e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 703 ctggaccagcataaattaggaaagaagcacaaaaagaacttggagaaactaa 754
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 99 ctggaccagcataaattaggaaagaggcacaaaaagaacttggagaaactaa 150
>gnl|LJGI|TC74003 similar to UniRef100_A8E1F9 Cluster: M34 protein; n=1; Murine
cytomegalovirus (strain K181)|Rep: M34 protein - Murine
cytomegalovirus (strain K181), partial (4%)
Length = 490
Score = 180 bits (91), Expect = 1e-44
Identities = 121/131 (92%)
Strand = Plus / Plus
Query: 77 tctccaccctcctccaccgcgtcgaagccctcgaatcctccctcaacctccacacacacc 136
||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 360 tctcctccctcctcgaccgcatcgaatccctcgaatcctccctcaacctccacacccacc 419
Query: 137 aacctctccgccacgccgccgcacgcgtgatccaaacccgctttcgctccctcctcgttc 196
|| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||
Sbjct: 420 aatctctccgccacgccgccgcgcgcgtgatccaaacccattttcgctccttcctcgttc 479
Query: 197 gcagatcaaga 207
|||||||||||
Sbjct: 480 gcagatcaaga 490
>gnl|LJGI|FS342835 weakly similar to UniRef100_A8J1N3 Cluster: Cell wall protein
pherophorin-C10; n=1; Chlamydomonas reinhardtii|Rep:
Cell wall protein pherophorin-C10 - Chlamydomonas
reinhardtii, partial (6%)
Length = 642
Score = 56.0 bits (28), Expect = 5e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 300 gctcaaccctcctggtggtgattccgatgccccatt 335
||||||||||||||||| ||||||| ||||||||||
Sbjct: 461 gctcaaccctcctggtgttgattcctatgccccatt 496
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 468 gctcagccctcctggtgttgattctgatgccccattgaa 506
||||| |||||||||||||||||| |||||||||||||
Sbjct: 461 gctcaaccctcctggtgttgattcctatgccccattgaa 499
>gnl|LJGI|TC73660 homologue to UniRef100_Q6NRE3 Cluster: MGC83886 protein; n=1;
Xenopus laevis|Rep: MGC83886 protein - Xenopus laevis
(African clawed frog), partial (4%)
Length = 583
Score = 56.0 bits (28), Expect = 5e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 300 gctcaaccctcctggtggtgattccgatgccccatt 335
||||||||||||||||| ||||||| ||||||||||
Sbjct: 403 gctcaaccctcctggtgttgattcctatgccccatt 438
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 468 gctcagccctcctggtgttgattctgatgccccattgaa 506
||||| |||||||||||||||||| |||||||||||||
Sbjct: 403 gctcaaccctcctggtgttgattcctatgccccattgaa 441