Miyakogusa Predicted Gene

Lj1g3v3006700.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3006700.1 Non Chatacterized Hit- tr|K3Z6S9|K3Z6S9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si022248,50.51,1e-18,seg,NULL,CUFF.29857.1
         (1374 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74003 similar to UniRef100_A8E1F9 Cluster: M34 protei...   379   e-104
gnl|LJGI|AW719969 similar to UniRef100_A7PN32 Cluster: Chromosom...   206   3e-52
gnl|LJGI|GO012415                                                      70   4e-11

>gnl|LJGI|TC74003 similar to UniRef100_A8E1F9 Cluster: M34 protein; n=1; Murine
           cytomegalovirus (strain K181)|Rep: M34 protein - Murine
           cytomegalovirus (strain K181), partial (4%)
          Length = 490

 Score =  379 bits (191), Expect = e-104
 Identities = 191/191 (100%)
 Strand = Plus / Plus

                                                                       
Query: 245 gcgacaacctcgatctcaacacccatcaccttaaacaccaacaccaaacccattccacca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gcgacaacctcgatctcaacacccatcaccttaaacaccaacaccaaacccattccacca 359

                                                                       
Query: 305 tctcctccctcctcgaccgcatcgaatccctcgaatcctccctcaacctccacacccacc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctcctccctcctcgaccgcatcgaatccctcgaatcctccctcaacctccacacccacc 419

                                                                       
Query: 365 aatctctccgccacgccgccgcgcgcgtgatccaaacccattttcgctccttcctcgttc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aatctctccgccacgccgccgcgcgcgtgatccaaacccattttcgctccttcctcgttc 479

                      
Query: 425 gcagatcaaga 435
           |||||||||||
Sbjct: 480 gcagatcaaga 490



 Score = 67.9 bits (34), Expect = 2e-10
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 73  agccactgctgctgcaacccttcttacagcaactgctg 110
           ||||||||| ||||||||||||||||||||||||||||
Sbjct: 128 agccactgccgctgcaacccttcttacagcaactgctg 165


>gnl|LJGI|AW719969 similar to UniRef100_A7PN32 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 263

 Score =  206 bits (104), Expect = 3e-52
 Identities = 134/144 (93%)
 Strand = Plus / Plus

                                                                       
Query: 301 accatctcctccctcctcgaccgcatcgaatccctcgaatcctccctcaacctccacacc 360
           ||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||| 
Sbjct: 70  accatctccaccctcctccaccgcgtcgaagccctcgaatcctccctcaacctccacaca 129

                                                                       
Query: 361 caccaatctctccgccacgccgccgcgcgcgtgatccaaacccattttcgctccttcctc 420
           |||||| ||||||||||||||||||| ||||||||||||||||  ||||||||| |||||
Sbjct: 130 caccaacctctccgccacgccgccgcacgcgtgatccaaacccgctttcgctccctcctc 189

                                   
Query: 421 gttcgcagatcaagaaccctcagc 444
           ||||||||||||||||||||||||
Sbjct: 190 gttcgcagatcaagaaccctcagc 213


>gnl|LJGI|GO012415 
          Length = 431

 Score = 69.9 bits (35), Expect = 4e-11
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                   
Query: 1297 ttctctgctccattgccacttaagatggaaaacaggact 1335
            |||||||||||||||||||||||||||||||||| ||||
Sbjct: 393  ttctctgctccattgccacttaagatggaaaacaagact 431