Miyakogusa Predicted Gene

Lj1g3v2996670.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2996670.2 Non Chatacterized Hit- tr|I3STY9|I3STY9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,98.29,0,Rad60-SLD_2,NULL; UBIQUITIN_2,Ubiquitin supergroup; no
description,NULL; Ubiquitin-like,NULL,CUFF.29851.2
         (354 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62347 weakly similar to UniRef100_Q8LCS8 Cluster: Mem...   702   0.0  
gnl|LJGI|TC82232 similar to UniRef100_Q8LCS8 Cluster: Membrane-a...   543   e-154
gnl|LJGI|BP033435 similar to UniRef100_Q8LCS8 Cluster: Membrane-...   100   1e-20

>gnl|LJGI|TC62347 weakly similar to UniRef100_Q8LCS8 Cluster: Membrane-anchored
           ubiquitin-fold protein 2; n=1; Arabidopsis thaliana|Rep:
           Membrane-anchored ubiquitin-fold protein 2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (83%)
          Length = 1131

 Score =  702 bits (354), Expect = 0.0
 Identities = 354/354 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgggactgaagagcagtttgagatcaagtttaggttgacggatggttctgatatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atggctgggactgaagagcagtttgagatcaagtttaggttgacggatggttctgatatt 385

                                                                       
Query: 61  ggccccaaaagttttgctgcagctacgagtattgcaactttaaaagaaagtattcttgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggccccaaaagttttgctgcagctacgagtattgcaactttaaaagaaagtattcttgct 445

                                                                       
Query: 121 cagtggccgaaagataaggagaatggcccaaggacagtaaaggatatgaagttaataagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cagtggccgaaagataaggagaatggcccaaggacagtaaaggatatgaagttaataagt 505

                                                                       
Query: 181 gcaggaaagattttggataacaacagaacagttggggaatgccagagcccattgtgtgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gcaggaaagattttggataacaacagaacagttggggaatgccagagcccattgtgtgat 565

                                                                       
Query: 241 gctcctgatactgttactacaatgcatgtggttgtgcaaccacctactacagagaaagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gctcctgatactgttactacaatgcatgtggttgtgcaaccacctactacagagaaagag 625

                                                                 
Query: 301 aagaaagctgcaagcgaaacaaagcagaacaaatgtctgtgtgttattttatag 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aagaaagctgcaagcgaaacaaagcagaacaaatgtctgtgtgttattttatag 679


>gnl|LJGI|TC82232 similar to UniRef100_Q8LCS8 Cluster: Membrane-anchored
           ubiquitin-fold protein 2; n=1; Arabidopsis thaliana|Rep:
           Membrane-anchored ubiquitin-fold protein 2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (68%)
          Length = 773

 Score =  543 bits (274), Expect = e-154
 Identities = 274/274 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgggactgaagagcagtttgagatcaagtttaggttgacggatggttctgatatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atggctgggactgaagagcagtttgagatcaagtttaggttgacggatggttctgatatt 559

                                                                       
Query: 61  ggccccaaaagttttgctgcagctacgagtattgcaactttaaaagaaagtattcttgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggccccaaaagttttgctgcagctacgagtattgcaactttaaaagaaagtattcttgct 619

                                                                       
Query: 121 cagtggccgaaagataaggagaatggcccaaggacagtaaaggatatgaagttaataagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagtggccgaaagataaggagaatggcccaaggacagtaaaggatatgaagttaataagt 679

                                                                       
Query: 181 gcaggaaagattttggataacaacagaacagttggggaatgccagagcccattgtgtgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gcaggaaagattttggataacaacagaacagttggggaatgccagagcccattgtgtgat 739

                                             
Query: 241 gctcctgatactgttactacaatgcatgtggttg 274
           ||||||||||||||||||||||||||||||||||
Sbjct: 740 gctcctgatactgttactacaatgcatgtggttg 773


>gnl|LJGI|BP033435 similar to UniRef100_Q8LCS8 Cluster: Membrane-anchored
           ubiquitin-fold protein 2; n=1; Arabidopsis thaliana|Rep:
           Membrane-anchored ubiquitin-fold protein 2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (35%)
          Length = 481

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                       
Query: 25  gagatcaagtttaggttgacggatggttctgatattggccccaaaagttttgctgcagct 84
           |||||||||||| | ||||  || || || |||||||||||||||||||||||||| |||
Sbjct: 441 gagatcaagtttcgattgagtgacgggtcggatattggccccaaaagttttgctgctgct 382

                                                             
Query: 85  acgagtattgcaactttaaaagaaagtattcttgctcagtggccgaaaga 134
           || || |||||| |  | |||||||||||||||||||| |||||||||||
Sbjct: 381 actagaattgcagcactgaaagaaagtattcttgctcaatggccgaaaga 332