Miyakogusa Predicted Gene
- Lj1g3v2996620.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2996620.3 Non Chatacterized Hit- tr|D8T4T9|D8T4T9_SELML
Putative uncharacterized protein OS=Selaginella moelle,57.14,5e-17,no
description,Zinc finger, RING/FYVE/PHD-type; ZF_RING_1,Zinc finger,
RING-type, conserved site; ZF,CUFF.29844.3
(368 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64151 similar to UniRef100_A7PN23 Cluster: Chromosome... 714 0.0
gnl|LJGI|TC78960 similar to UniRef100_A7PN23 Cluster: Chromosome... 230 5e-60
gnl|LJGI|TC73642 similar to UniRef100_A7PN23 Cluster: Chromosome... 119 1e-26
>gnl|LJGI|TC64151 similar to UniRef100_A7PN23 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (94%)
Length = 1070
Score = 714 bits (360), Expect = 0.0
Identities = 366/368 (99%)
Strand = Plus / Plus
Query: 1 atgtggaactttgcatcaagttgcatttctggaagtgtaggtctgaaaaatgattgtcta 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atgtggaactttgcgtcaagttgcatttctggaagtgtaggtctgaaaaatgattgtcta 266
Query: 61 aagccaactcactccgcttcagaatgctctgacgatgagacttctatgacgaccagggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagccaactcactccgcttcagaatgctctgacgatgagacttctatgacgaccagggag 326
Query: 121 gaagggctagaatgcccaatatgctgggaatcttttaacattgttgaaaacgttccttac 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 327 gaagggctagaatgcccaatatgctgggaatcttttgacattgttgaaaacgttccttac 386
Query: 181 gttttatggtgtggccacaccctctgtaaaaattgcatcctgggactgcaatgggctatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gttttatggtgtggccacaccctctgtaaaaattgcatcctgggactgcaatgggctatg 446
Query: 241 gtgaaattcccaactcttccaattcagcttccactttttatctcctgcccctggtgcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtgaaattcccaactcttccaattcagcttccactttttatctcctgcccctggtgcaac 506
Query: 301 attttatctttccgtttagttcatcagggaaatttgaaattccctcgcaagaactatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 attttatctttccgtttagttcatcagggaaatttgaaattccctcgcaagaactatttt 566
Query: 361 cttctttg 368
||||||||
Sbjct: 567 cttctttg 574
>gnl|LJGI|TC78960 similar to UniRef100_A7PN23 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 612
Score = 230 bits (116), Expect = 5e-60
Identities = 305/368 (82%)
Strand = Plus / Plus
Query: 1 atgtggaactttgcatcaagttgcatttctggaagtgtaggtctgaaaaatgattgtcta 60
||||||||||||||||||| |||||| |||||| ||| | ||||||||||||| | |
Sbjct: 61 atgtggaactttgcatcaaactgcattgctggaaatgtggaactgaaaaatgattcttca 120
Query: 61 aagccaactcactccgcttcagaatgctctgacgatgagacttctatgacgaccagggag 120
|||| |||||| || | ||| ||||| ||||| || ||||||||| | | ||| |||
Sbjct: 121 aagctaactcattctggttcggaatgttctgatgacgagacttctgttgtgggcagagag 180
Query: 121 gaagggctagaatgcccaatatgctgggaatcttttaacattgttgaaaacgttccttac 180
||||| || |||||||| |||||||||||||||| || ||||| ||||| || || ||
Sbjct: 181 gaaggactggaatgcccggtatgctgggaatctttcaatattgtggaaaatgtaccctat 240
Query: 181 gttttatggtgtggccacaccctctgtaaaaattgcatcctgggactgcaatgggctatg 240
||||||||||||||||| ||||| ||||||||||| ||||| ||| ||||||||||| |
Sbjct: 241 gttttatggtgtggccataccctttgtaaaaattgtatcctcggattgcaatgggctgtt 300
Query: 241 gtgaaattcccaactcttccaattcagcttccactttttatctcctgcccctggtgcaac 300
||||| || || || | ||| |||| ||||| ||||||||||||||||| |||||||||
Sbjct: 301 gtgaagtttccgacgttgccagttcaacttccgctttttatctcctgcccatggtgcaac 360
Query: 301 attttatctttccgtttagttcatcagggaaatttgaaattccctcgcaagaactatttt 360
||||||| || ||||||||| ||| ||||||| | || ||||||||||||||||| ||
Sbjct: 361 cttttatcctttcgtttagtttatcggggaaatcttaagttccctcgcaagaactacttc 420
Query: 361 cttctttg 368
||||||||
Sbjct: 421 cttctttg 428
>gnl|LJGI|TC73642 similar to UniRef100_A7PN23 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 880
Score = 119 bits (60), Expect = 1e-26
Identities = 111/128 (86%)
Strand = Plus / Plus
Query: 121 gaagggctagaatgcccaatatgctgggaatcttttaacattgttgaaaacgttccttac 180
||||||||||| || |||||||||||||||||||| ||||||||||| || || |||||
Sbjct: 558 gaagggctagagtgtccaatatgctgggaatctttcaacattgttgagaatgtgccttat 617
Query: 181 gttttatggtgtggccacaccctctgtaaaaattgcatcctgggactgcaatgggctatg 240
|| || ||||| ||||||||| | ||||||||||| |||| ||||| || |||||||||
Sbjct: 618 gtgttgtggtgcggccacaccttgtgtaaaaattgtgtccttggacttcagtgggctatg 677
Query: 241 gtgaaatt 248
||||||||
Sbjct: 678 gtgaaatt 685