Miyakogusa Predicted Gene

Lj1g3v2984470.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2984470.1 CUFF.29822.1
         (363 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74478 similar to UniRef100_A2Q200 Cluster: PSP, proli...   712   0.0  
gnl|LJGI|FS355962 homologue to UniRef100_A2Q200 Cluster: PSP, pr...    98   5e-20

>gnl|LJGI|TC74478 similar to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1; Medicago
            truncatula|Rep: PSP, proline-rich - Medicago truncatula
            (Barrel medic), partial (42%)
          Length = 1189

 Score =  712 bits (359), Expect = 0.0
 Identities = 362/363 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgaggaggagccagtttttaataccaaacactggggtgatctggaggagaaggacgaag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694  atgaggaggagccagtttttaataccaaacactggggtgatctggaggagaaggacgaag 753

                                                                        
Query: 61   aagaggaacttgaagctggtacttatgtttttaatctctcaaggtatgaaaagccaaggc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754  aagaggaacttgaagctggtacttatgtttttaatctctcaaggtatgaaaagccaaggc 813

                                                                        
Query: 121  cagaagagaagttgcgtagtcagcgctttagtgacacggttgcagagaatgagaagaaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814  cagaagagaagttgcgtagtcagcgctttagtgacacggttgcagagaatgagaagaaga 873

                                                                        
Query: 181  gaaaaagaaccatgcaagaaaaggaggttggcaagtggaggaagaaggacttcttttagg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874  gaaaaagaaccatgcaagaaaaggaggttggcaagtggaggaagaaggacttcttttagg 933

                                                                        
Query: 241  ggtggcagtcgccaattaccttttcctttgtttgcaaatggccatggagggtgcaattct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934  ggtggcagtcgccaattaccttttcctttgtttgcaaatggccatggagggtgcaattct 993

                                                                        
Query: 301  ctgcttcccatgaatagaaattttaatttaaacgagctgtctggtcgcggttgtatataa 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 994  ctgcttcccatgaatagaaattttaatttaaacgagctgtctggtcgcggtcgtatataa 1053

               
Query: 361  ata 363
            |||
Sbjct: 1054 ata 1056


>gnl|LJGI|FS355962 homologue to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1;
           Medicago truncatula|Rep: PSP, proline-rich - Medicago
           truncatula (Barrel medic), partial (8%)
          Length = 581

 Score = 97.6 bits (49), Expect = 5e-20
 Identities = 78/87 (89%), Gaps = 3/87 (3%)
 Strand = Plus / Minus

                                                                       
Query: 147 tttagtgacacggttgcagagaatgagaagaagagaaaaagaaccatgcaagaaaaggag 206
           |||||||||| |||||||||||||||||| |||||||||||||  |||||||||||||| 
Sbjct: 528 tttagtgacatggttgcagagaatgagaaaaagagaaaaagaaaaatgcaagaaaagga- 470

                                      
Query: 207 gttggcaagtggaggaagaaggacttc 233
             |||||||| || |||||||||||||
Sbjct: 469 --tggcaagtcgaagaagaaggacttc 445