Miyakogusa Predicted Gene
- Lj1g3v2980350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2980350.1 Non Chatacterized Hit- tr|J3MK59|J3MK59_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G1,25.42,5e-18,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; PPR_2,Penta,CUFF.29808.1
(2572 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP041405 weakly similar to UniRef100_A7QFV5 Cluster: Ch... 317 2e-85
>gnl|LJGI|BP041405 weakly similar to UniRef100_A7QFV5 Cluster: Chromosome undetermined
scaffold_89, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_89, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(20%)
Length = 546
Score = 317 bits (160), Expect = 2e-85
Identities = 454/552 (82%), Gaps = 10/552 (1%)
Strand = Plus / Plus
Query: 511 attctgcctagtatttggacttgtaactttctcatcaaccggttggttgatcataatgaa 570
|||||||||| ||| || ||||||||||||||| ||||||||||||||| ||| | ||
Sbjct: 1 attctgcctaatatctg-acttgtaactttctcctcaaccggttggttggacatggtaaa 59
Query: 571 gtggagagggctttggccatttataagcagctcaagaggcttggtttgagccccaacaat 630
||||||| || |||| |||||| |||||||||||||||||||||||||||| || ||
Sbjct: 60 gtggagatggtcctggcaatttatgagcagctcaagaggcttggtttgagccctaatcat 119
Query: 631 tacacctatgccattgttgtcaagggactgtgtaggaaaggttacttggaagaggcggag 690
||||||||||||||||| | |||| |||| |||||||||| || | ||
Sbjct: 120 tacacctatgccattgtcatgaaggcgctgtataggaaaggt---------gatgtggtt 170
Query: 691 cacatgttaaaagaaatggatgaagctggggtgaatcttgattcccattgttgtgcagct 750
|| |||| |||||||||| ||||||||||||| || ||||||| ||||| ||||| |
Sbjct: 171 catgtgtttcaagaaatggaggaagctggggtgactcctgattcctattgtaatgcagtt 230
Query: 751 ttaattgagggcatttgcaatcattgtagttctgatttgggatatgaagcgctccaaaaa 810
|||||||||||| | ||||| || ||| ||||||| ||||||| | |||||| ||
Sbjct: 231 ttaattgagggcctctgcaaaaatcataggtctgattggggatatcagtttctccaagaa 290
Query: 811 ttcagaatgatgaatgcccctatagaggatcatgcctacgccgctgttattcgtgggttt 870
|| |||| | ||||||| || ||||||| | |||| ||| |||||||||||| ||||||
Sbjct: 291 tttagaaaggtgaatgctcccatagaggtttatgcttacaccgctgttattcacgggttt 350
Query: 871 tgtaatgaaatgaaattagatgaagcggagattgttgttttggacatggaaagccaggga 930
|||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||
Sbjct: 351 tgtaatgaaatgaaattagatgaagctgagagtgttgttttggacatggaaaggcagggg 410
Query: 931 ttggttcctgacgtgcgtatttattctgcattgatctatggatattgtaagaatcgtaat 990
||||||||||| ||| |||||||||||||||||||| ||| |||||||||| || ||||
Sbjct: 411 ttggttcctgatgtgaatatttattctgcattgatctgtggttattgtaagagtcataat 470
Query: 991 ctacacaaagtttcagagttatgtagtcaaatgacttcaaagggtataaaaacaaattgt 1050
|| | || || || ||| |||| | | | |||| |||||||||||||||||||||||||
Sbjct: 471 ctgcccagagctttagacttatatgctgacatgatttcaaagggtataaaaacaaattgt 530
Query: 1051 gtagttgctagc 1062
||| ||| ||||
Sbjct: 531 gtacttgttagc 542