Miyakogusa Predicted Gene
- Lj1g3v2980340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2980340.1 Non Chatacterized Hit- tr|K3YG97|K3YG97_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si013265,22.4,1e-17,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; PPR:
p,CUFF.29803.1
(2578 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP041405 weakly similar to UniRef100_A7QFV5 Cluster: Ch... 381 e-104
>gnl|LJGI|BP041405 weakly similar to UniRef100_A7QFV5 Cluster: Chromosome undetermined
scaffold_89, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_89, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(20%)
Length = 546
Score = 381 bits (192), Expect = e-104
Identities = 446/532 (83%), Gaps = 9/532 (1%)
Strand = Plus / Plus
Query: 537 ttgtaactttctcctcaaccgtttggttgcacatggtaatgtggagagggccttggccat 596
||||||||||||||||||||| ||||||| ||||||||| ||||||| || | |||| ||
Sbjct: 20 ttgtaactttctcctcaaccggttggttggacatggtaaagtggagatggtcctggcaat 79
Query: 597 ttacaagcagctcaagagtcttggtttgagccccaacaatttcacctatgccattgtaat 656
||| ||||||||||||| |||||||||||||| || ||| ||||||||||||||| ||
Sbjct: 80 ttatgagcagctcaagaggcttggtttgagccctaatcattacacctatgccattgtcat 139
Query: 657 caaggcaatgtgtaggaaaggttatttggaagaggcagatcatgtgtataataaaatgaa 716
||||| ||| |||||||||| || ||| |||||||| | | ||||| |
Sbjct: 140 gaaggcgctgtataggaaaggtgatgtggt---------tcatgtgtttcaagaaatgga 190
Query: 717 ggaagctggggtgaatcctgattcctattgttgtgcagcattaattgagggcatttgcaa 776
|||||||||||||| |||||||||||||||| ||||| |||||||||||| | |||||
Sbjct: 191 ggaagctggggtgactcctgattcctattgtaatgcagttttaattgagggcctctgcaa 250
Query: 777 tcgtcgtagttctgatttgggatataaaaggctccaagatttaagaaggatgaatgaccc 836
|| ||| ||||||| ||||||| | |||||||| || |||| | |||||| ||
Sbjct: 251 aaatcataggtctgattggggatatcagtttctccaagaatttagaaaggtgaatgctcc 310
Query: 837 tataggggtttatgcctacaccgttgttattcgtgggttttgtaatgaaatgaaattata 896
|||| ||||||||| ||||||| |||||||| |||||||||||||||||||||||| |
Sbjct: 311 catagaggtttatgcttacaccgctgttattcacgggttttgtaatgaaatgaaattaga 370
Query: 897 tgaagctgagagtgttattttggacatggaaagccaggggttggttcctgatgtgtatat 956
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 371 tgaagctgagagtgttgttttggacatggaaaggcaggggttggttcctgatgtgaatat 430
Query: 957 ttattctgcattgatccatagatattgtaagagtcataatctgcggaaagcttcagagtt 1016
|||||||||||||||| | | |||||||||||||||||||||| | ||||| ||| ||
Sbjct: 431 ttattctgcattgatctgtggttattgtaagagtcataatctgcccagagctttagactt 490
Query: 1017 atgtagtcaaatgatttcaaagggtataaaaacaaattgtgtagttgctagc 1068
|| | | | ||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 491 atatgctgacatgatttcaaagggtataaaaacaaattgtgtacttgttagc 542