Miyakogusa Predicted Gene
- Lj1g3v2978140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2978140.1 Non Chatacterized Hit- tr|A9PHB0|A9PHB0_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,43.8,5e-19,STRUCTURAL CONSTITUENT OF RIBOSOME,NULL; 60S
RIBOSOMAL PROTEIN L34,Ribosomal protein L34Ae; seg,NULL,CUFF.34321.1
(663 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74315 weakly similar to UniRef100_A7PMX8 Cluster: Chr... 1291 0.0
gnl|LJGI|TC70424 similar to UniRef100_A7PMX8 Cluster: Chromosome... 176 1e-43
>gnl|LJGI|TC74315 weakly similar to UniRef100_A7PMX8 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (72%)
Length = 1257
Score = 1291 bits (651), Expect = 0.0
Identities = 660/663 (99%)
Strand = Plus / Plus
Query: 1 atggtctatttcgatagctcaatctccctctccaagtcctccgttgaccaaccaccttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atggtctatttcgatagctcaatctccctctccaagtcctccgttgaccaaccaccttcc 421
Query: 61 atggcgaattcacttgatctcggttcgaagccgaggaatcggaaagctgccaattccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 422 atggcgaattcacttgatctcggttcgaagccgaggaatcggaaagctgtcaattccctt 481
Query: 121 caggttccgccctgccagcgatctcaatcggcggtggtggatgttgtgattttcgtggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caggttccgccctgccagcgatctcaatcggcggtggtggatgttgtgattttcgtggcg 541
Query: 181 gttgtcgcggctttcgggtttttgctgtttccttatgttaaggctgtgatgactgagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gttgtcgcggctttcgggtttttgctgtttccttatgttaaggctgtgatgactgagagt 601
Query: 241 tttaagattggtggtgtgattatgaatttgatgagagaagaggtttctggtactccttgg 300
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 602 tttaagattggtggtgtgatcatgaatttggtgagagaagaggtttctggtactccttgg 661
Query: 301 atctatgtgttcataggggtttttgttgcttgtgctgtattcaccacatggttgttggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 atctatgtgttcataggggtttttgttgcttgtgctgtattcaccacatggttgttggtg 721
Query: 361 gcttccacaacaaggaaatgtgggaaccgttattgcaaaggtctcaagaaggctgcagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gcttccacaacaaggaaatgtgggaaccgttattgcaaaggtctcaagaaggctgcagag 781
Query: 421 tttgatattcagctggagactgaggactgtgtgaagaattctccttcattgagcaaggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tttgatattcagctggagactgaggactgtgtgaagaattctccttcattgagcaaggat 841
Query: 481 ggtacagttaagaagggtctgttcaagcttccttgtgagcatcatcgcgaactcgaagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ggtacagttaagaagggtctgttcaagcttccttgtgagcatcatcgcgaactcgaagcc 901
Query: 541 gagcttaagaagatggcaccccccaatggaagggctgttcttgttcttagggcaaagtgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 gagcttaagaagatggcaccccccaatggaagggctgttcttgttcttagggcaaagtgt 961
Query: 601 ggctgttctgttggcaggttagaagttccgggtccccggaagaatcgaaagatgaagaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ggctgttctgttggcaggttagaagttccgggtccccggaagaatcgaaagatgaagaag 1021
Query: 661 tag 663
|||
Sbjct: 1022 tag 1024
>gnl|LJGI|TC70424 similar to UniRef100_A7PMX8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 1489
Score = 176 bits (89), Expect = 1e-43
Identities = 220/263 (83%), Gaps = 3/263 (1%)
Strand = Plus / Plus
Query: 373 aggaaatgtgggaaccgttattgcaaaggtctcaagaaggctgcagagtttgatattcag 432
||||| |||||||| | | |||| || ||||| ||||| ||||| |||||||||||||||
Sbjct: 785 aggaagtgtgggaatcctaattgtaagggtctgaagaaagctgctgagtttgatattcag 844
Query: 433 ctggagactgaggactgtgtgaagaattctccttcattgagcaagga---tggtacagtt 489
||||||||||||| |||||||||||||||||||| |||||||| || |||| |||
Sbjct: 845 ttggagactgaggattgtgtgaagaattctccttctttgagcaaagatggtggtgatgtt 904
Query: 490 aagaagggtctgttcaagcttccttgtgagcatcatcgcgaactcgaagccgagcttaag 549
||||||||||| || | || ||| |||| |||||| | ||||| ||||| ||||| |||
Sbjct: 905 aagaagggtctctttgaactgcctcgtgatcatcatagggaacttgaagctgagctgaag 964
Query: 550 aagatggcaccccccaatggaagggctgttcttgttcttagggcaaagtgtggctgttct 609
|||||||| || || |||||||| ||||| ||| |||| | |||| |||||||||||||
Sbjct: 965 aagatggcgccgcctaatggaagagctgtgcttattctccgagcaaggtgtggctgttct 1024
Query: 610 gttggcaggttagaagttccggg 632
||||| ||||||||||| |||||
Sbjct: 1025 gttggtaggttagaagtaccggg 1047