Miyakogusa Predicted Gene
- Lj1g3v2975960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2975960.1 Non Chatacterized Hit- tr|I1KTT0|I1KTT0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75.36,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; DYW_deaminase,NULL; no description,Tet,CUFF.34123.1
(2091 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chr... 908 0.0
gnl|LJGI|TC74035 similar to UniRef100_A7PHH0 Cluster: Chromosome... 615 e-175
gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosom... 539 e-152
gnl|LJGI|FS343712 531 e-150
gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9... 123 5e-27
>gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 1047
Score = 908 bits (458), Expect = 0.0
Identities = 644/705 (91%), Gaps = 7/705 (0%)
Strand = Plus / Plus
Query: 4 gagattccactctcacgtttccaaaccatatcacgggaccaattccaagatttttccttc 63
|||||| ||||||| | || ||| ||| |||||||||| ||||||||||| ||||||||
Sbjct: 168 gagattacactctcccattaccagaccttatcacgggatcaattccaagacttttccttt 227
Query: 64 ctgggttcttcctca------aaattttcctcctttaggtactgttttgcctctaaggtg 117
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 228 ctgggttcttcctccctcgccaaattttcctcctttaggtactgttttgcctcaaaggtg 287
Query: 118 agatattggcgctacccattttcccagattcgttgttcctcttccatggaacaagggttg 177
||| | ||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 288 agaaactggagctacccatttcgtcagattcgttgttcatcttccatggaacaagggttg 347
Query: 178 aggcccaagcctaagaaaattgggcatgtggagaggaaagttccagttttggaggatgcc 237
|||||||||| ||||||||||||||||||||||| ||| | | | |||||| ||||||
Sbjct: 348 aggcccaagcgaaagaaaattgggcatgtggagagaaaaatgtcgggtttggatgatgcc 407
Query: 238 catgtcatgaaaccatccacttctgggctctgtagtcagattgagaagttggcattgtgt 297
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 408 caggtcatgaaaccatccacttctgggctctgtagtcagattgagaagttggctttgtgt 467
Query: 298 aataggtacaaggaggcaatggacctgtttgaaattttgg-agcttgaaggtgatggtgc 356
| ||||||||| || ||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 468 actaggtacaaagacgcaatggacctgtttgaaattttgggaacttgaaggtgatggtgc 527
Query: 357 tgatgtgggtgggagtacttatgatgcgttggtgaatgtttgtgttggtttgagatcaat 416
|||||||||||| || | |||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 528 tgatgtgggtggtagcaattataatgctttggtgaatgtttgtgttggtttgagatcaat 587
Query: 417 tagaggggttaagagggtgtttggttatatgattagtaatgggtttgagcctgatttgta 476
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 588 tagaggggttaagagggtgtttaattatatgattagtaatgggtttgagcctgatctgta 647
Query: 477 tatgatgaacagggttttgcatatgcatgtcagatgtggtctcatgcttgatgcacgcaa 536
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 648 tatgatgaacaaggttttgcatatgcatgtgagatgtggtctcatgcttgatgcacgcaa 707
Query: 537 gctgtttgctgatatgcctgagagagacgcggtttcctggatgaccttgatcagcggact 596
|||||||||| |||| |||||||||||||||||||||||||||||||||| | |||||
Sbjct: 708 gctgtttgctaatatttttgagagagacgcggtttcctggatgaccttgatcggtggact 767
Query: 597 tgtggactctgggaattacgctgaagcttttgagcagtttttgtgcatgtgggaggagtt 656
|||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 768 tgtggactctgggaattatgttgaagcttttgagcagtttttgtgcatgtgggaagagtt 827
Query: 657 taatgacggtaggtctcgcacttttgccaccatggttcgggcatc 701
||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 828 taatgacggcaggtctcgcacttttgccaccatggtttgggcatc 872
Score = 111 bits (56), Expect = 2e-23
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 1041 tcatgctgcgttagttcgccatggttttggttcagatatcgtggcaaacacaggacttgt 1100
||||| |||||||||||| |||||||||| | |||||| ||| |||||||||| |||||
Sbjct: 871 tcatgttgcgttagttcgttatggttttggcttagatattgtgacaaacacagggcttgt 930
Query: 1101 tgacttctatagcaaatggggtaggatg 1128
||||||||||||||||||||||||||||
Sbjct: 931 tgacttctatagcaaatggggtaggatg 958
>gnl|LJGI|TC74035 similar to UniRef100_A7PHH0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 556
Score = 615 bits (310), Expect = e-175
Identities = 313/314 (99%)
Strand = Plus / Plus
Query: 1778 aggtggacaacctgatggatgagatatcaaggcatggttacattgaggagcatgaaatgt 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggtggacaacctgatggatgagatatcaaggcatggttacattgaggagcatgaaatgt 61
Query: 1838 tgcttcctgatgtggatgaagaggaacaacgcattctaaaataccatagtgaaatgctgg 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgcttcctgatgtggatgaagaggaacaacgcattctaaaataccatagtgaaatgctgg 121
Query: 1898 gaatagcttatggtcttatcaacactcctgattggacacctttacaaataactcagggcc 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaatagcttatggtcttatcaacactcctgattggacacctttacaaataactcagggcc 181
Query: 1958 atcgtgtatgtgggaattgccataatgcaatcaaacttatagccatggttacaggacggg 2017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atcgtgtatgtgggaattgccataatgcaatcaaacttatagccatggttacaggacggg 241
Query: 2018 agattgtggtaagagatgctagtagatttcaccattttagaaatgggacatgttcttgtg 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agattgtggtaagagatgctagtagatttcaccattttagaaatgggacatgttcttgtg 301
Query: 2078 gcgactattggtga 2091
|||| |||||||||
Sbjct: 302 gcgattattggtga 315
>gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 741
Score = 539 bits (272), Expect = e-152
Identities = 464/528 (87%)
Strand = Plus / Plus
Query: 122 attggcgctacccattttcccagattcgttgttcctcttccatggaacaagggttgaggc 181
||||| ||||||| || ||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 213 attggagctaccctttcccccggattcgttgttcctcttccatggaacaagggctgaggc 272
Query: 182 ccaagcctaagaaaattgggcatgtggagaggaaagttccagttttggaggatgcccatg 241
| || || ||||||| || | ||||||| || ||| | ||||||||||| ||||||||
Sbjct: 273 caaaacccaagaaaactgagtatgtggatagaaaaatgccagttttggatgatgcccaga 332
Query: 242 tcatgaaaccatccacttctgggctctgtagtcagattgagaagttggcattgtgtaata 301
||||||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||
Sbjct: 333 tcatgaaaccatccactcctggactctgtagtcagatagagaagttgggtttgtgtaata 392
Query: 302 ggtacaaggaggcaatggacctgtttgaaattttggagcttgaaggtgatggtgctgatg 361
|| | | |||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 393 ggcatagggaggcaatggagctgtttgaaattttggaacttgaaggtgactgtgctgatg 452
Query: 362 tgggtgggagtacttatgatgcgttggtgaatgtttgtgttggtttgagatcaattagag 421
|||||| || || |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 453 tgggtgctagcacatatgatgctttggtgaatgtttgtgttggtttgagatcgattagag 512
Query: 422 gggttaagagggtgtttggttatatgattagtaatgggtttgagcctgatttgtatatga 481
| ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 513 gtgttaagaaggtgttcaattatatgattagtagtgggtttgagcctgatttgtatatga 572
Query: 482 tgaacagggttttgcatatgcatgtcagatgtggtctcatgcttgatgcacgcaagctgt 541
||||||||||||||| ||||||||| | ||||||||||||||| ||||| ||||||||||
Sbjct: 573 tgaacagggttttgcttatgcatgtgaaatgtggtctcatgctcgatgcgcgcaagctgt 632
Query: 542 ttgctgatatgcctgagagagacgcggtttcctggatgaccttgatcagcggacttgtgg 601
||| |||||||||||||||||| | |||||| ||||||||| |||| ||||||||||||
Sbjct: 633 ttggtgatatgcctgagagagatgtggtttcgtggatgaccgtgattggcggacttgtgg 692
Query: 602 actctgggaattacgctgaagcttttgagcagtttttgtgcatgtggg 649
| || ||| ||||| |||||||||| | | |||||||| ||||||||
Sbjct: 693 attccggggattactctgaagctttcgggttgtttttgttcatgtggg 740
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 atggagattccactctcacgtttccaaaccatatcacgggaccaattccaaga 53
||||||||||||||||| ||| ||| ||| |||||| |||||||||||||||
Sbjct: 131 atggagattccactctccagttaccagaccttatcactggaccaattccaaga 183
>gnl|LJGI|FS343712
Length = 438
Score = 531 bits (268), Expect = e-150
Identities = 277/280 (98%)
Strand = Plus / Plus
Query: 1 atggagattccactctcacgtttccaaaccatatcacgggaccaattccaagatttttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 159 atggagattccactctcacgtttccaaaccatatcacgggaccaattcctagatttttcc 218
Query: 61 ttcctgggttcttcctcaaaattttcctcctttaggtactgttttgcctctaaggtgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ttcctgggttcttcctcaaaattttcctcctttaggtactgttttgcctctaaggtgaga 278
Query: 121 tattggcgctacccattttcccagattcgttgttcctcttccatggaacaagggttgagg 180
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 279 tattggagctacccattttcccagattcgttgttcctcttccatggaacatgggttgagg 338
Query: 181 cccaagcctaagaaaattgggcatgtggagaggaaagttccagttttggaggatgcccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cccaagcctaagaaaattgggcatgtggagaggaaagttccagttttggaggatgcccat 398
Query: 241 gtcatgaaaccatccacttctgggctctgtagtcagattg 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gtcatgaaaccatccacttctgggctctgtagtcagattg 438
>gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9C16.15; n=1;
Arabidopsis thaliana|Rep: F9C16.15 - Arabidopsis
thaliana (Mouse-ear cress), partial (3%)
Length = 651
Score = 123 bits (62), Expect = 5e-27
Identities = 120/138 (86%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 477 tatgatgaacagggttttgcatatgcatgtcagatgtggtctcatgcttgatgcacgcaa 536
||||| ||||| | |||||| ||| |||||||||| |||||||||||||||||||| |||
Sbjct: 446 tatgaggaacatgattttgcttatacatgtcagatatggtctcatgcttgatgcacacaa 505
Query: 537 gctgtttgctgatatgcctgagagagacgcggtttcctggatgaccttgatcagcggact 596
| |||||| |||||| ||| ||||||| | |||||||||||||||| |||| | |||||
Sbjct: 506 gttgtttgatgatattccttagagagatgtggtttcctggatgaccgtgatgggtggact 565
Query: 597 tgt-ggactctgggaatt 613
||| ||||||||||||||
Sbjct: 566 tgtgggactctgggaatt 583