Miyakogusa Predicted Gene
- Lj1g3v2975950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2975950.1 tr|B9VJS9|B9VJS9_LOTJA Starch synthase IIb
OS=Lotus japonicus PE=2 SV=1,99.56,0,STARCH SYNTHASE,NULL;
GLYCOSYLTRANSFERASE,NULL; UDP-Glycosyltransferase/glycogen
phosphorylase,NULL;,CUFF.29780.1
(1368 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS321561 similar to UniRef100_A7PMX5 Cluster: Chromosom... 676 0.0
gnl|LJGI|AU251634 homologue to UniRef100_A7PMX5 Cluster: Chromos... 285 4e-76
gnl|LJGI|TC69026 similar to UniRef100_A7PMX5 Cluster: Chromosome... 174 9e-43
>gnl|LJGI|FS321561 similar to UniRef100_A7PMX5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 558
Score = 676 bits (341), Expect = 0.0
Identities = 341/341 (100%)
Strand = Plus / Plus
Query: 1028 gtgtagacatattgctcatgccatcaagatttgagccatgtgggttgaaccaactctatg 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtagacatattgctcatgccatcaagatttgagccatgtgggttgaaccaactctatg 60
Query: 1088 ccatgagttatggaacagttcctgttgtacatgctgttggtggattgagagatactgtgc 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccatgagttatggaacagttcctgttgtacatgctgttggtggattgagagatactgtgc 120
Query: 1148 agccttttgatcctttcaatgagtcaggacttgggtggacttttgatagtgcagattctg 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agccttttgatcctttcaatgagtcaggacttgggtggacttttgatagtgcagattctg 180
Query: 1208 gtaagttaatacatgcattagggaattgtttattgacctatagggagcataagaagagct 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtaagttaatacatgcattagggaattgtttattgacctatagggagcataagaagagct 240
Query: 1268 gggaagggattcaaaggagaggaatgatgcaagatcttagctgggacaatgctgctcagc 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggaagggattcaaaggagaggaatgatgcaagatcttagctgggacaatgctgctcagc 300
Query: 1328 tatatgaggaggtgcttgttgctgccaaataccaatggtga 1368
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatatgaggaggtgcttgttgctgccaaataccaatggtga 341
>gnl|LJGI|AU251634 homologue to UniRef100_A7PMX5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 371
Score = 285 bits (144), Expect = 4e-76
Identities = 294/344 (85%)
Strand = Plus / Plus
Query: 772 caaaaggagcttggtttgcctgtaaatgaggatgtcccagtgattggtttcattggaagg 831
||||| ||||||||||||||||| |||||||| || | || || ||||||||||||
Sbjct: 1 caaaaagagcttggtttgcctgtccgcgaggatgttccgttaatcggcttcattggaagg 60
Query: 832 ttggataatcagaaaggtgttgatatcataggtgaagcaattccttggatgatgggtcag 891
| ||| | |||||||| |||||| |||||| ||||||||||||||||||||||| |||
Sbjct: 61 cttgatcaccagaaaggcgttgatctcatagctgaagcaattccttggatgatggaccag 120
Query: 892 gatgtgcaactagtcatgttgggaactggaaggcctgatcttgaacacatgctcaggcaa 951
|||||||||||| ||||||| |||||||||||||| || || ||||| ||||| ||||||
Sbjct: 121 gatgtgcaactaatcatgttaggaactggaaggccggacctagaacagatgcttaggcaa 180
Query: 952 tttgaaaaccaacacaatgacaagatcagaggatgggttggattttctgtgaagatggct 1011
||||||| ||||||| ||||| |||| || ||||| || ||||| ||||||| ||||
Sbjct: 181 tttgaaagccaacaccgcgacaaagtcagggggtgggtcggcttttcggtgaagacggct 240
Query: 1012 cacaggatcactgcaggtgtagacatattgctcatgccatcaagatttgagccatgtggg 1071
|||||||| || ||||||||||||||| ||||||||||||| ||||||||||| || ||
Sbjct: 241 cacaggataacagcaggtgtagacatactgctcatgccatcgagatttgagccgtgcgga 300
Query: 1072 ttgaaccaactctatgccatgagttatggaacagttcctgttgt 1115
||||| |||||||||||||||| ||| ||||| |||||||||||
Sbjct: 301 ttgaatcaactctatgccatgaattacggaactgttcctgttgt 344
>gnl|LJGI|TC69026 similar to UniRef100_A7PMX5 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 751
Score = 174 bits (88), Expect = 9e-43
Identities = 157/180 (87%)
Strand = Plus / Plus
Query: 1189 tttgatagtgcagattctggtaagttaatacatgcattagggaattgtttattgacctat 1248
|||||||||||||| ||| |||||||||||| || |||||||| || |||| ||||||
Sbjct: 3 tttgatagtgcagaagctgataagttaatacacgcgttagggaactgcttatggacctac 62
Query: 1249 agggagcataagaagagctgggaagggattcaaaggagaggaatgatgcaagatcttagc 1308
|||||| |||||||||||||||||||| |||| | |||| ||| ||||||||||||
Sbjct: 63 agggagtataagaagagctgggaagggcttcagaaacgagggatgtcgcaagatcttagt 122
Query: 1309 tgggacaatgctgctcagctatatgaggaggtgcttgttgctgccaaataccaatggtga 1368
||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 123 tgggacaatgcagctcagcagtatgaggaggttcttgttgctgccaaataccaatggtga 182