Miyakogusa Predicted Gene

Lj1g3v2953540.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2953540.1 CUFF.29758.1
         (355 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP055490 weakly similar to UniRef100_Q54LJ4 Cluster: Ty...   121   3e-27
gnl|LJGI|BP041637                                                      78   4e-14

>gnl|LJGI|BP055490 weakly similar to UniRef100_Q54LJ4 Cluster: Type A von Willebrand
           factor domain-containing protein; n=1; Dictyostelium
           discoideum|Rep:, partial (0%)
          Length = 531

 Score =  121 bits (61), Expect = 3e-27
 Identities = 137/160 (85%), Gaps = 3/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 187 ttcccatgtttcacattcatctcctcattcaccttcaccaatt-ctctctcttcatcttc 245
           |||||||||||||  |||||||||||||||||||||||| ||| || | ||| | |||||
Sbjct: 529 ttcccatgtttcaatttcatctcctcattcaccttcaccgattcctttttctacttcttc 470

                                                                       
Query: 246 caccctatctaatccatcatattccacaatcaaattctcgaaagatattatttttcagaa 305
           | ||||| |||||||||| ||||||||  |||||||||| | ||||||| | | |||| |
Sbjct: 469 ctccctaactaatccatcttattccactttcaaattctctagagatattttatctcagta 410

                                                   
Query: 306 atccaaa--aactatgttctccacttcacgtccttaaaaa 343
           |||||||  |||||  ||||||||||||||||||||||||
Sbjct: 409 atccaaattaactactttctccacttcacgtccttaaaaa 370


>gnl|LJGI|BP041637 
          Length = 457

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 137/166 (82%), Gaps = 4/166 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   gttcagttgaattctcaccatctcctactcctt-cccat-tttcaattccttctcaatat 61
           ||||| |||||| |||||||||||||| | ||| ||||| ||||| |||||||||   ||
Sbjct: 40  gttcatttgaatcctcaccatctcctatttctttcccatgtttcagttccttctcctcat 99

                                                                       
Query: 62  tcaccacactaactcctctctttcttctttttcctctccatgtaatctgtctttttccac 121
           ||||| ||| | ||  |||||||| |||| || |||| |||||||||  | || ||||||
Sbjct: 100 tcacctcaccatct--tctctttcatcttcttgctcttcatgtaatccatattattccac 157

                                                         
Query: 122 tttctaaaattcaaaagatgctcaatttcattagtccaaaatttct 167
           ||||  |||||  ||||||||  |||||||||||||||||||||||
Sbjct: 158 tttcccaaattttaaagatgcataatttcattagtccaaaatttct 203



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 172 accatctcctactatttcccatgtttcacattcatctcctcattcaccttcaccaattct 231
           ||||||||| ||| ||||||||| ||||| | | ||||||||||||||||||||  ||||
Sbjct: 340 accatctccaactttttcccatggttcacttccttctcctcattcaccttcaccttttct 399

                   
Query: 232 ctctcttc 239
           || |||||
Sbjct: 400 ctttcttc 407