Miyakogusa Predicted Gene
- Lj1g3v2952280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2952280.1 Non Chatacterized Hit- tr|I1LQI0|I1LQI0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34269
PE,42.53,0.00000005,DNA-binding domain in plant proteins such
as,AP2/ERF domain; AP2,AP2/ERF domain; SUBFAMILY NOT
NAMED,CUFF.29741.1
(894 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO040275 similar to UniRef100_A7PMN8 Cluster: Chromosom... 969 0.0
gnl|LJGI|DC595978 similar to UniRef100_A7PMN8 Cluster: Chromosom... 246 2e-64
gnl|LJGI|TC78753 similar to UniRef100_A7PMN8 Cluster: Chromosome... 94 2e-18
gnl|LJGI|TC75721 similar to UniRef100_Q94AN4 Cluster: AP2-like e... 66 4e-10
gnl|LJGI|TC58976 homologue to UniRef100_A9JQY7 Cluster: AP2 prot... 66 4e-10
>gnl|LJGI|GO040275 similar to UniRef100_A7PMN8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 507
Score = 969 bits (489), Expect = 0.0
Identities = 501/505 (99%)
Strand = Plus / Plus
Query: 348 tgctcatgcatatgacattgcagccattgagtacagagggattcatgctgtaacaaactt 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctcatgcatatgacattgcagccattgagtacagagggattcatgctgtaacaaactt 60
Query: 408 tgatttgagcacttacataaaatggttaaagcctgaaactggaagtaccccagaagcaaa 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatttgagcacttacataaaatggttaaagcctgaaactggaagtaccccagaagcaaa 120
Query: 468 acttcatccacaggcactgccagagtctcaaacagtggcttccccatctaactctagtct 527
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 acttcatccacaggcactgccagagcctcaaacagtggcttccccatctaactctagtct 180
Query: 528 aatagaagagtcaaagtccttgacccttcacaacagttttttcagtccagattacctgaa 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatagaagagtcaaagtccttgacccttcacaacagttttttcagtccagattacctgaa 240
Query: 588 ttcccttgaaaagcaagaagcttttgaaagccaatccttccaattctccagcaacaagtc 647
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 ttcccttgaaaagcaagaagcttttgaaagccaatccctccaattctccagcaacaagtc 300
Query: 648 atcttctcccactgcacttggccttcttctccgctcttcattatttagagaattggttga 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcttctcccactgcacttggccttcttctccgctcttcattatttagagaattggttga 360
Query: 708 gaagaactcaaatgtgtctgaaaatgaaactgatggggaagtcacaaaggagcaacagat 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagaactcaaatgtgtctgaaaatgaaactgatggggaagtcacaaaggagcaacagat 420
Query: 768 acagatagctagtgatgatgaactgggtggaatcttctatgatggcattggtggcatccc 827
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcagatagctagtgatgatgaactgggtggaatcttctatgatggcattggtggcatccc 480
Query: 828 atttatctttgctcccaacaggttc 852
|||||||||||||| ||||||||||
Sbjct: 481 atttatctttgctctcaacaggttc 505
>gnl|LJGI|DC595978 similar to UniRef100_A7PMN8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 554
Score = 246 bits (124), Expect = 2e-64
Identities = 195/219 (89%)
Strand = Plus / Plus
Query: 30 agtttatcttggggcttatgatgaagaagaatctgctgccagagcatatgatttagctgc 89
|||||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||
Sbjct: 336 agtttaccttggggcttatgatgaagaagaatcagcagccagagcatatgatctagctgc 395
Query: 90 acttaagtactggggaacttcaactttcaccaattttccgatatcagattatgagaaaga 149
||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||| |
Sbjct: 396 actgaagtactggggaacatcaactttcaccaattttcctatttcagattatgagaaaca 455
Query: 150 gatacaaataatgcagacaatgaccaaagaggagtacttggccactttgagaagaaagag 209
|||| | |||||||| || |||| |||||||||||||||||| ||| | || ||||||||
Sbjct: 456 gatagagataatgcaaactatgancaaagaggagtacttggctactctaaggagaaagag 515
Query: 210 cagtggcttttcaagaggggtctcaaagtataggggtgt 248
||||||||||| ||| | | |||||||||||||||||
Sbjct: 516 tagtggcttttccagacgtgcatcaaagtataggggtgt 554
>gnl|LJGI|TC78753 similar to UniRef100_A7PMN8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 471
Score = 93.7 bits (47), Expect = 2e-18
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 627 ccaattctccagcaacaagtcatcttctcccactgcacttggccttcttctccgctcttc 686
||||||||||||| || ||||||||||| ||||||||||| || ||||| |||||| |
Sbjct: 81 ccaattctccagccctaactcatcttctccaactgcacttgggctccttcttcgctctac 140
Query: 687 attatttagagaattggttgagaagaactcaaatgtgtctgaaaatgaaactgatgggga 746
| |||| |||||||||||||| ||||| | || | ||||| ||||||||||||||||
Sbjct: 141 agtattcagagaattggttgaaaagaatttgaacatatctgaggatgaaactgatgggga 200
Query: 747 agtcacaaaggagcaacag 765
|| |||||| || ||||||
Sbjct: 201 agacacaaaagatcaacag 219
>gnl|LJGI|TC75721 similar to UniRef100_Q94AN4 Cluster: AP2-like ethylene-responsive
transcription factor At1g16060; n=1; Arabidopsis
thaliana|Rep: AP2-like ethylene-responsive transcription
factor At1g16060 - Arabidopsis thaliana (Mouse-ear
cress), partial (57%)
Length = 1390
Score = 65.9 bits (33), Expect = 4e-10
Identities = 120/149 (80%)
Strand = Plus / Plus
Query: 199 agaagaaagagcagtggcttttcaagaggggtctcaaagtataggggtgttgcaaggcac 258
||||||| |||||||| || || |||| |||||||| || || || |||||||| |||
Sbjct: 454 agaagaagaagcagtgggttctctcgaggagtctcaaaatacagaggagttgcaagacac 513
Query: 259 caccataatggtagatgggaagcaaggataggaagggtttttggaaacaaatatctctac 318
|||||||| || ||||||||||| | || || ||||| | || ||||||||||| |||
Sbjct: 514 caccataacggaagatgggaagctcgaattggcagggtctcgggcaacaaatatctatac 573
Query: 319 cttggcacctacgggacacaagaggaagc 347
||||| || |||| |||||||| |||||
Sbjct: 574 cttggaacttacgctacacaagaagaagc 602
>gnl|LJGI|TC58976 homologue to UniRef100_A9JQY7 Cluster: AP2 protein; n=1; Elaeis
guineensis|Rep: AP2 protein - Elaeis guineensis var.
tenera (Oil palm), partial (42%)
Length = 1188
Score = 65.9 bits (33), Expect = 4e-10
Identities = 99/121 (81%)
Strand = Plus / Plus
Query: 251 caaggcaccaccataatggtagatgggaagcaaggataggaagggtttttggaaacaaat 310
||||||| ||||| |||| ||||| | ||||||||||| || ||| |||||||||
Sbjct: 916 caaggcatcaccagcatggccgatggcaggcaaggataggtagagttgccggaaacaaag 975
Query: 311 atctctaccttggcacctacgggacacaagaggaagctgctcatgcatatgacattgcag 370
| |||||||||||||| | | | |||||||| |||||||| | ||||||||||||||||
Sbjct: 976 acctctaccttggcactttcagtacacaagaagaagctgcagaagcatatgacattgcag 1035
Query: 371 c 371
|
Sbjct: 1036 c 1036