Miyakogusa Predicted Gene
- Lj1g3v2940680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2940680.1 Non Chatacterized Hit- tr|K3YRB2|K3YRB2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016730,67.33,4e-19,CATIONIC AMINO ACID TRANSPORTER,Cationic amino
acid transporter; AMINO ACID TRANSPORTER,Amino acid/p,CUFF.29736.1
(342 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57492 similar to UniRef100_A7PKC8 Cluster: Chromosome... 440 e-123
gnl|LJGI|TC71862 similar to UniRef100_A7PKC8 Cluster: Chromosome... 305 9e-83
gnl|LJGI|BP043617 80 1e-14
>gnl|LJGI|TC57492 similar to UniRef100_A7PKC8 Cluster: Chromosome chr15 scaffold_19,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_19, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 812
Score = 440 bits (222), Expect = e-123
Identities = 276/294 (93%)
Strand = Plus / Plus
Query: 49 tcatcttattgctcccgtttttggtcctcggcactccggtccaagctcctcgtgtcgccg 108
|||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 116 tcatcttattgctcccgtttttggtcgtcggcgctccgctccaagctcctcgtctcgccg 175
Query: 109 gcggagaaggccgctcgtgacagctccagcagcggactctcccgccgcctcggtgtcctc 168
||||||||||| ||||||||||||||| |||| |||||||||||||| || |||||||||
Sbjct: 176 gcggagaaggctgctcgtgacagctccggcaggggactctcccgccggcttggtgtcctc 235
Query: 169 gacctcctgctgcttggtattggtgcttccattggtgccggcatcttcgtcatcaccgga 228
||||||||||| ||||| || || ||||||||||||||||||||||||||| ||||||||
Sbjct: 236 gacctcctgctccttggaatcggcgcttccattggtgccggcatcttcgtcctcaccgga 295
Query: 229 accgttgcccgcgacgccggacccggagtaacaataagttttatacttgcgggggcatcc 288
||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 296 accgttgcccgcgacaccggacccggagtaacaataagttttgtacttgcgggaacatcc 355
Query: 289 tgtgttataaatgcactctgttttgctgagctagcttctcgatttcctgctgtt 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgtgttataaatgcactctgttttgctgagctagcttctcgatttcctgctgtt 409
>gnl|LJGI|TC71862 similar to UniRef100_A7PKC8 Cluster: Chromosome chr15 scaffold_19,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_19, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 787
Score = 305 bits (154), Expect = 9e-83
Identities = 259/294 (88%)
Strand = Plus / Plus
Query: 45 atcatcatcttattgctcccgtttttggtcctcggcactccggtccaagctcctcgtgtc 104
|||||||||||||||||||||||| ||||| || || ||||| ||||| | |||||| ||
Sbjct: 176 atcatcatcttattgctcccgtttctggtcatcagcgctccgatccaaacccctcgtatc 235
Query: 105 gccggcggagaaggccgctcgtgacagctccagcagcggactctcccgccgcctcggtgt 164
||||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||||
Sbjct: 236 gccggcggagaaggccgctcgcgacagctccggcaggggtctctcccgccgcctcggtgt 295
Query: 165 cctcgacctcctgctgcttggtattggtgcttccattggtgccggcatcttcgtcatcac 224
| |||||||||| || || || || || || |||||||| || ||||| || ||| ||||
Sbjct: 296 cttcgacctccttctcctcgggatcggcgcctccattggcgctggcatatttgtcgtcac 355
Query: 225 cggaaccgttgcccgcgacgccggacccggagtaacaataagttttatacttgcgggggc 284
||| || || || ||||||||||| |||||||||||| | ||||||||||||||||| ||
Sbjct: 356 cggcactgtagctcgcgacgccggtcccggagtaacagttagttttatacttgcgggagc 415
Query: 285 atcctgtgttataaatgcactctgttttgctgagctagcttctcgatttcctgc 338
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 416 atcctgtgttataaatgcactctgttatgctgagctagcttctcggtttcctgc 469
>gnl|LJGI|BP043617
Length = 384
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 1 atgggattggctggtgctgcttctccttcttctccatcct 40
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atgggattggctggtgctgcttctccttcttctccatcct 1