Miyakogusa Predicted Gene

Lj1g3v2927320.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2927320.2 tr|B9MVA0|B9MVA0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_591787 PE=4
SV=1,42.37,0.000000000000001,UPF0565,Uncharacterised protein family
UPF0565,CUFF.29704.2
         (987 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CB827975                                                     906   0.0  

>gnl|LJGI|CB827975 
          Length = 545

 Score =  906 bits (457), Expect = 0.0
 Identities = 457/457 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaacgttggagtggggttttgagagtcccactgcatcctaacagcaaggcattccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  atggaacgttggagtggggttttgagagtcccactgcatcctaacagcaaggcattccat 148

                                                                       
Query: 61  agagttggtgcatctctctgcctttctccggaaacaggaactttgagtgtacctatcgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 agagttggtgcatctctctgcctttctccggaaacaggaactttgagtgtacctatcgca 208

                                                                       
Query: 121 aacgccatctttttctgcggtgatcgagttgaagggactggtaacccagtgattgagcgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aacgccatctttttctgcggtgatcgagttgaagggactggtaacccagtgattgagcgg 268

                                                                       
Query: 181 ctatcagatttacagaaactatctgaaattgttgtatccaaatttggctctttcatcaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctatcagatttacagaaactatctgaaattgttgtatccaaatttggctctttcatcaat 328

                                                                       
Query: 241 gcgtgggttattgagtcttctgtttataaaggaccttttgctgtctacaaggacttcata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gcgtgggttattgagtcttctgtttataaaggaccttttgctgtctacaaggacttcata 388

                                                                       
Query: 301 ccatcagtgaatcaatatggagagccaagctcataccatccaattggattcccggcatcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ccatcagtgaatcaatatggagagccaagctcataccatccaattggattcccggcatcc 448

                                                                       
Query: 361 acttcaactgtctcactcttatctaattgccttgaagaagtaaagaaagtcattttagga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acttcaactgtctcactcttatctaattgccttgaagaagtaaagaaagtcattttagga 508

                                                
Query: 421 aagcaagtagataccaagtttgttcacactccttcct 457
           |||||||||||||||||||||||||||||||||||||
Sbjct: 509 aagcaagtagataccaagtttgttcacactccttcct 545