Miyakogusa Predicted Gene
- Lj1g3v2923020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2923020.1 Non Chatacterized Hit- tr|I3STC5|I3STC5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.19,0,seg,NULL;
HABP4_PAI-RBP1,Hyaluronan/mRNA-binding protein; Stm1_N,Stm1,
N-terminal; NUCLEAR RNA BINDI,CUFF.30385.1
(1113 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70839 similar to UniRef100_O04237 Cluster: Transcript... 1963 0.0
gnl|LJGI|TC59679 similar to UniRef100_O04237 Cluster: Transcript... 345 4e-94
gnl|LJGI|GO031739 similar to UniRef100_O04237 Cluster: Transcrip... 264 1e-69
gnl|LJGI|BP038568 similar to UniRef100_O04237 Cluster: Transcrip... 176 2e-43
gnl|LJGI|TC78973 similar to UniRef100_O04237 Cluster: Transcript... 64 2e-09
>gnl|LJGI|TC70839 similar to UniRef100_O04237 Cluster: Transcription factor; n=1; Vicia
faba var. minor|Rep: Transcription factor - Vicia faba
var. minor, partial (85%)
Length = 1665
Score = 1963 bits (990), Expect = 0.0
Identities = 1072/1113 (96%)
Strand = Plus / Plus
Query: 1 atggcgaccatgaacccttttgatttgttgggtgatgacgctgaggatccttctcagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atggcgaccatgaacccttttgatttgttgggtgatgacgctgaggatccttctcagctc 304
Query: 61 atcgctgccgaacagctcaaggctgcggccgcggcggcgactgctcctcccaagaaagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atcgctgccgaacagctcaaggctgcggccgcggcggcgactgctcctcccaagaaagcg 364
Query: 121 gcgggggctcaggaccagggcaagcaggccaaaccggctcagatgccttccaagccactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gcgggggctcaggaccagggcaagcaggccaaaccggctcagatgccttccaagccactt 424
Query: 181 cctcctgctcaggctgtgagggatgccagaaatgaaccatcacgaggaggccgtggaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cctcctgctcaggctgtgagggatgccagaaatgaaccatcacgaggaggccgtggaggt 484
Query: 241 gcaagaggtgctggtcgtggatttggacgtggtcgtggtttcaatcgtgacttctccaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gcaagaggtgctggtcgtggatttggacgtggtcgtggtttcaatcgtgacttctccaat 544
Query: 301 gatgagaactcattccctgcctctggagcccctgataatctgggtccttttgaaggtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gatgagaactcattccctgcctctggagcccctgataatctgggtccttttgaaggtgat 604
Query: 361 tctgagaaggcttcagaaaggcgtggttatggtgcaccacgaggtccttatcnnnnnnnn 420
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tctgagaaggcttcagaaaggcgtggttatggtgcaccacgaggtccttatcgtggtggt 664
Query: 421 nnnnnnnnncgacgtggaggcttcagcaatggtgaagctgatgaagaaggacgacctcga 480
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ggtggtggtcgacgtggaggcttcagcaatggtgaagctgatgaagaaggacgacctcga 724
Query: 481 agagcatttgaacgccacagtggaactggccgaggaagtggattcaaacgtgaaggcgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 agagcatttgaacgccacagtggaactggccgaggaagtggattcaaacgtgaaggcgct 784
Query: 541 ggacgtggtaactggggaacacaaagtgatgaaattgctcaggtgactgatgaagtggcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ggacgtggtaactggggaacacaaagtgatgaaattgctcaggtgactgatgaagtggcg 844
Query: 601 aatgaaactgnnnnnnntttgagcgatgagaagcctgctgttgaagatgttgctgatgga 660
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 aatgaaactgaaaaaaatttgagcgatgagaagcctgctgttgaagatgttgctgatgga 904
Query: 661 aacaaggagagttctgccaatgaaaatgaagaaaaagagcctgaggataaggagatgact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 aacaaggagagttctgccaatgaaaatgaagaaaaagagcctgaggataaggagatgact 964
Query: 721 ctggaggaatatgaaaaggtgctggaagaaaaaaggaaggccttgcaagctcaaaagact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 ctggaggaatatgaaaaggtgctggaagaaaaaaggaaggccttgcaagctcaaaagact 1024
Query: 781 gaagggagaaaggtagacataaaagagttcgagtccatgcaacccttatcctgcaagaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gaagggagaaaggtagacataaaagagttcgagtccatgcaacccttatcctgcaagaaa 1084
Query: 841 gacaataatgacatcttcgctaaattgggatctgataaggataaacgcaaagaggctttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 gacaataatgacatcttcgctaaattgggatctgataaggataaacgcaaagaggctttt 1144
Query: 901 gagaaggaagagaaggccaagaagtctgtgagcatcaatgagtttctgaagcctgctgaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 gagaaggaagagaaggccaagaagtctgtgagcatcaatgagtttctgaagcctgctgaa 1204
Query: 961 ggggaaacctactatcccagtggacgcggaaggggtcgtggccgtggctcacnnnnnnnn 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 ggggaaacctactatcccagtggacgcggaaggggtcgtggccgtggctcacgaggagga 1264
Query: 1021 nnnnnnnnnagtttccgtggaaatgctaccagcaatgcacctgctccatccattgaagat 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 ggaggaggaagtttccgtggaaatgctaccagcaatgcacctgctccatccattgaagat 1324
Query: 1081 cctgggcatttcccaaccttaggtggcaagtga 1113
|||||||||||||||||||||||||||||||||
Sbjct: 1325 cctgggcatttcccaaccttaggtggcaagtga 1357
>gnl|LJGI|TC59679 similar to UniRef100_O04237 Cluster: Transcription factor; n=1; Vicia
faba var. minor|Rep: Transcription factor - Vicia faba
var. minor, partial (85%)
Length = 1699
Score = 345 bits (174), Expect = 4e-94
Identities = 435/524 (83%), Gaps = 9/524 (1%)
Strand = Plus / Plus
Query: 445 agcaatggtgaagctgatgaagaaggacgacctcgaagagcatttgaacgccacagtgga 504
||||| |||||||||| |||||| ||||| || || ||| |||||||||||||||||||
Sbjct: 678 agcaacggtgaagctggtgaagatggacgcccacggagaacatttgaacgccacagtggg 737
Query: 505 actggccgaggaagtggattcaaacgtgaaggcgctggacgtggtaactggggaacacaa 564
|| || |||||| |||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 738 accggacgaggaggtgggttcaaacgtgaaggtgctggacgtggtaactggggaacacag 797
Query: 565 agtgatgaaattgctcaggtgactgatgaagtggcgaatgaaactgnnnnnnntttgagc 624
|||||||||||||||||| ||||| ||||||| ||||||| ||| | || |
Sbjct: 798 tctgatgaaattgctcaggtcactgaggaagtggtgaatgaagctgaaaagaatgtgggt 857
Query: 625 gatgagaagcctgctgttg------aagatgttgctgatggaaacaaggagagttctgcc 678
|||||||||||||| | || |||| | || |||||||||||||| || |||
Sbjct: 858 gatgagaagcctgcagctgaggaacaagaggcagcagatggaaacaaggaaagccctgtt 917
Query: 679 aatgaaaatgaagaaaaagagcctgaggataaggagatgactctggaggaatatgaaaag 738
||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 918 aatgaaaatgaagaaaaggagcctgaggataaggagatgacactggaagaatatgagaag 977
Query: 739 gtgctggaagaaaaaaggaaggccttgcaagctcaaaagactgaagggagaaaggtagac 798
||||||||||| ||||| || ||| ||||||| | |||||||||| ||||||||| ||
Sbjct: 978 gtgctggaagagaaaagaaaagccctgcaagcactcaagactgaagtgagaaaggtggat 1037
Query: 799 ataaaagagttcgagtccatgcaacccttatcctgcaagaaagacaataatgacatcttc 858
|| ||||| || |||||||| || | ||| ||||||||||||| |||| |||||
Sbjct: 1038 gctaaggagtttgaatccatgcagccactttcccacaagaaagacaatgatgagatcttt 1097
Query: 859 gctaaattgggatctgataaggataaacgcaaagaggcttttgagaaggaagagaaggcc 918
||||||||||||||||| |||||||| |||| ||| ||| |||||||| ||||| |
Sbjct: 1098 gctaaattgggatctgacaaggataagcgcagagatgctattgagaag---gagaaatca 1154
Query: 919 aagaagtctgtgagcatcaatgagtttctgaagcctgctgaagg 962
||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1155 aagaagtctgtcagcatcaatgagtttttgaagcctgctgaagg 1198
Score = 63.9 bits (32), Expect = 2e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 154 ccggctcagatgccttccaagccacttcctcctgctcaggctgtgagggatgccagaaat 213
||||| ||| ||||||||||||| |||||||| |||||||||||||||| ||| |||
Sbjct: 372 ccggcccagttgccttccaagccgcttcctcccactcaggctgtgagggagtccaagaat 431
Query: 214 gaaccatcacgaggaggccgtggaggtgcaagaggtgctggtcgtggatttggacg 269
||| | || || || |||||||| |||| |||| | ||| ||||||||||||||
Sbjct: 432 gaagcttctcgtggcggccgtgggggtggccgaggaggtggacgtggatttggacg 487
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 atggcgaccatgaacccttttgatttgttgggtgatgacgctgagga 47
||||| |||||||| |||||||||||| | |||||||| ||||||||
Sbjct: 204 atggcaaccatgaatccttttgatttgctcggtgatgatgctgagga 250
>gnl|LJGI|GO031739 similar to UniRef100_O04237 Cluster: Transcription factor; n=1;
Vicia faba var. minor|Rep: Transcription factor - Vicia
faba var. minor, partial (42%)
Length = 686
Score = 264 bits (133), Expect = 1e-69
Identities = 355/431 (82%), Gaps = 9/431 (2%)
Strand = Plus / Plus
Query: 538 gctggacgtggtaactggggaacacaaagtgatgaaattgctcaggtgactgatgaagtg 597
|||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 169 gctggacgtggtaactggggaacacagtctgatgaaattgctcaggtcactgaggaagtg 228
Query: 598 gcgaatgaaactgnnnnnnntttgagcgatgagaagcctgctgttga------agatgtt 651
| ||||||| ||| | || | |||||||||||||| | ||| ||| |
Sbjct: 229 gtgaatgaagctgaaaagaatgtgggtgatgagaagcctgcagctgaggaacaagaggca 288
Query: 652 gctgatggaaacaaggagagttctgccaatgaaaatgaagaaaaagagcctgaggataag 711
|| |||||||||||||| || ||| ||||||||||||||||| |||||||||||||||
Sbjct: 289 gcagatggaaacaaggaaagccctgttaatgaaaatgaagaaaaggagcctgaggataag 348
Query: 712 gagatgactctggaggaatatgaaaaggtgctggaagaaaaaaggaaggccttgcaagct 771
|||||||| ||||| |||||||| |||||||||||||| ||||| || ||| |||||||
Sbjct: 349 gagatgacactggaagaatatgagaaggtgctggaagagaaaagaaaagccctgcaagca 408
Query: 772 caaaagactgaagggagaaaggtagacataaaagagttcgagtccatgcaacccttatcc 831
| |||||||||| ||||||||| || || ||||| || |||||||| || | |||
Sbjct: 409 ctcaagactgaagtgagaaaggtggatgctaaggagtttgaatccatgcagccactttcc 468
Query: 832 tgcaagaaagacaataatgacatcttcgctaaattgggatctgataaggataaacgcaaa 891
||||||||||||| |||| ||||| ||||||||||||||||| |||||||| |||| |
Sbjct: 469 cacaagaaagacaatgatgagatctttgctaaattgggatctgacaaggataagcgcaga 528
Query: 892 gaggcttttgagaaggaagagaaggccaagaagtctgtgagcatcaatgagtttctgaag 951
|| ||| |||||||| ||||| | ||||||||||| ||||||||||||||| |||||
Sbjct: 529 gatgctattgagaag---gagaaatcaaagaagtctgtcagcatcaatgagtttttgaag 585
Query: 952 cctgctgaagg 962
|||||||||||
Sbjct: 586 cctgctgaagg 596
>gnl|LJGI|BP038568 similar to UniRef100_O04237 Cluster: Transcription factor; n=1;
Vicia faba var. minor|Rep: Transcription factor - Vicia
faba var. minor, partial (23%)
Length = 553
Score = 176 bits (89), Expect = 2e-43
Identities = 212/253 (83%)
Strand = Plus / Plus
Query: 656 atggaaacaaggagagttctgccaatgaaaatgaagaaaaagagcctgaggataaggaga 715
||||||||||||| || ||| ||||||| ||||||||| ||||||||||| |||||||
Sbjct: 74 atggaaacaaggaaagccctgttaatgaaagtgaagaaaaggagcctgaggacaaggaga 133
Query: 716 tgactctggaggaatatgaaaaggtgctggaagaaaaaaggaaggccttgcaagctcaaa 775
|||| ||||| |||||||| |||||||||||||| ||||| || ||| ||||||| | |
Sbjct: 134 tgacactggaagaatatgagaaggtgctggaagagaaaagaaaagccctgcaagcactca 193
Query: 776 agactgaagggagaaaggtagacataaaagagttcgagtccatgcaacccttatcctgca 835
||||||||| ||||||||| || ||| ||||| || |||||||| || | ||| ||
Sbjct: 194 agactgaagtgagaaaggtggatgcaaaggagtttgaatccatgcagccactttcccaca 253
Query: 836 agaaagacaataatgacatcttcgctaaattgggatctgataaggataaacgcaaagagg 895
|||||||||| |||| ||||| ||||||||||||||||| |||||||| |||| ||| |
Sbjct: 254 agaaagacaacgatgagatctttgctaaattgggatctgacaaggataagcgcagagatg 313
Query: 896 cttttgagaagga 908
|| ||||||||||
Sbjct: 314 ctattgagaagga 326
>gnl|LJGI|TC78973 similar to UniRef100_O04237 Cluster: Transcription factor; n=1;
Vicia faba var. minor|Rep: Transcription factor - Vicia
faba var. minor, partial (34%)
Length = 739
Score = 63.9 bits (32), Expect = 2e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 154 ccggctcagatgccttccaagccacttcctcctgctcaggctgtgagggatgccagaaat 213
||||| ||| ||||||||||||| |||||||| |||||||||||||||| ||| |||
Sbjct: 368 ccggcccagttgccttccaagccgcttcctcccactcaggctgtgagggagtccaagaat 427
Query: 214 gaaccatcacgaggaggccgtggaggtgcaagaggtgctggtcgtggatttggacg 269
||| | || || || |||||||| |||| |||| | ||| ||||||||||||||
Sbjct: 428 gaagcttctcgtggcggccgtgggggtggccgaggaggtggacgtggatttggacg 483
Score = 61.9 bits (31), Expect = 8e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 445 agcaatggtgaagctgatgaagaaggacgacctcgaagagcatttgaacgccacagtgg 503
||||| |||||||||| |||||| ||||| || || ||| |||||||||||||||||||
Sbjct: 674 agcaacggtgaagctggtgaagatggacgcccacggagaacatttgaacgccacagtgg 732
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 atggcgaccatgaacccttttgatttgttgggtgatgacgctgagga 47
||||| |||||||| |||||||||||| | |||||||| ||||||||
Sbjct: 200 atggcaaccatgaatccttttgatttgctcggtgatgatgctgagga 246