Miyakogusa Predicted Gene
- Lj1g3v2910580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2910580.1 tr|G7ICH9|G7ICH9_MEDTR Leucine-rich repeat family
protein / protein kinase family protein
OS=Medicag,45.08,4e-19,seg,NULL; Protein kinase-like (PK-like),Protein
kinase-like domain; LRRNT_2,Leucine-rich repeat-cont,CUFF.29831.1
(609 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69125 similar to UniRef100_A7Q9H4 Cluster: Chromosome... 341 3e-93
gnl|LJGI|BP033681 weakly similar to UniRef100_Q75WU3 Cluster: Le... 313 7e-85
gnl|LJGI|DC598610 weakly similar to UniRef100_A7QCQ6 Cluster: Ch... 198 3e-50
gnl|LJGI|AV416024 similar to UniRef100_A7PFL6 Cluster: Chromosom... 139 2e-32
>gnl|LJGI|TC69125 similar to UniRef100_A7Q9H4 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 588
Score = 341 bits (172), Expect = 3e-93
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 94 gctcaagtgactgaaggaagtgctctgttgaaatggaaacagagccttgacaaccaaagc 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gctcaagtgactgaaggaagtgctctgttgaaatggaaacagagccttgacaaccaaagc 152
Query: 154 caagctctcttgtcaacttggacaggttctgatccatgcaaatggaaaggaattcaatgt 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 caagctctcttgtcaacttggacaggttctgatccatgcaaatggaaaggaattcaatgt 212
Query: 214 gacaaatccaactccatctccaacataagtcttgcaaattatggactcaaag 265
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gacaaatccaactccatctccaacataagtcttgcaaattatggactcaaag 264
>gnl|LJGI|BP033681 weakly similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat
receptor-like protein kinase 1; n=1; Populus nigra|Rep:
Leucine-rich repeat receptor-like protein kinase 1 -
Populus nigra (Lombardy poplar), partial (8%)
Length = 440
Score = 313 bits (158), Expect = 7e-85
Identities = 240/266 (90%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 1 atggtacgcatgctggttgtgattcaaagaagctctcaaatccagttcatgttcttctgt 60
||||||| |||||| || ||||||||||||| ||| ||||| ||||||||||| | | |
Sbjct: 27 atggtacacatgcttgt-gtgattcaaagaacctcccaaattcagttcatgtttctgtat 85
Query: 61 gtccttctaacacttttgcttccccaagatgcagctcaagtgactgaaggaagtgctctg 120
|||||||||||||| |||||||||||| ||||||| ||| || ||||| || |||||||
Sbjct: 86 atccttctaacacttctgcttccccaagctgcagctgaagagagtgaagcaaatgctctg 145
Query: 121 ttgaaatggaaacagagccttgacaaccaaagccaagctctcttgtcaacttggacaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttgaaatggaaacagagccttgacaaccaaagccaagctctcttgtcaacttggacaggt 205
Query: 181 tctgatccatgcaaatggaaaggaattcaatgtgacaaatccaactccatctccaacata 240
||||||||||||||||||| ||||||||| ||||||||||||| ||| ||||| | |||
Sbjct: 206 tctgatccatgcaaatggagaggaattcagtgtgacaaatccagctcaatctctagaata 265
Query: 241 agtcttgcaaattatggactcaaagg 266
|||||||||||||||||||| |||||
Sbjct: 266 agtcttgcaaattatggactaaaagg 291
>gnl|LJGI|DC598610 weakly similar to UniRef100_A7QCQ6 Cluster: Chromosome chr12
scaffold_78, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_78, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 568
Score = 198 bits (100), Expect = 3e-50
Identities = 139/152 (91%)
Strand = Plus / Plus
Query: 115 gctctgttgaaatggaaacagagccttgacaaccaaagccaagctctcttgtcaacttgg 174
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gctctattgaagtggaaacaaagccttgacaaccaaagccaagctctcttgtcaaattgg 60
Query: 175 acaggttctgatccatgcaaatggaaaggaattcaatgtgacaaatccaactccatctcc 234
||||||||||||||||||||||||| |||||| || ||||||||||||| |||||||||
Sbjct: 61 acaggttctgatccatgcaaatggagaggaatccagtgtgacaaatccagctccatctct 120
Query: 235 aacataagtcttgcaaattatggactcaaagg 266
| ||||||||| | |||||||||||| |||||
Sbjct: 121 agcataagtctggaaaattatggactaaaagg 152
>gnl|LJGI|AV416024 similar to UniRef100_A7PFL6 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 267
Score = 139 bits (70), Expect = 2e-32
Identities = 91/98 (92%)
Strand = Plus / Plus
Query: 510 ttttgatgacaaatatctcattggagtgggaggtcaaggaaacgtttacagggcgttgtt 569
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||
Sbjct: 1 ttttgatgacaaatatctcattggagtgggaggtcaaggaaatgtttacatggcggagtt 60
Query: 570 gccagcaggtttggttgtggctgtgaagaagcttcatt 607
|||||| ||||||||||| ||||||||||| |||||||
Sbjct: 61 gccagcgggtttggttgttgctgtgaagaaacttcatt 98