Miyakogusa Predicted Gene

Lj1g3v2908520.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2908520.1 Non Chatacterized Hit- tr|A5AWF7|A5AWF7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.46,0.0000001,PRA1,Prenylated rab acceptor PRA1;
seg,NULL,CUFF.29658.1
         (558 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80437 weakly similar to UniRef100_A6EZN4 Cluster: Pre...   952   0.0  

>gnl|LJGI|TC80437 weakly similar to UniRef100_A6EZN4 Cluster: Predicted membrane
           protein; n=1; Marinobacter algicola DG893|Rep: Predicted
           membrane protein - Marinobacter algicola DG893, partial
           (11%)
          Length = 644

 Score =  952 bits (480), Expect = 0.0
 Identities = 521/528 (98%), Gaps = 5/528 (0%)
 Strand = Plus / Plus

                                                                       
Query: 36  ttcctcaaccccttcatccactgacaacaactatgaagcaaaagataagctgtaccatga 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttcctcaaccccttcatccactgacaacaactatgaagcaaaagataagctgtaccatga 60

                                                                       
Query: 96  gttcaaattcaaattctactgccccattgatattccctcaacatcagaagctacagcagt 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gttcaaattcaaattctactgccccattgatattccctcaacatcagaagctacagcagt 120

                                                                       
Query: 156 tagaatcctcaaaaatttcacgaatctgggattgtactacacgctcttcgtgtggatcat 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagaatcctcaaaaatttcacgaatctgggattgtactacacgctcttcgtgtggatcat 180

                                                                       
Query: 216 actcttcataaccctgatcccagagcgcaaggtgtcgtt-gatt-cttttggttatcatg 273
           ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 181 actcttcataaccctgatcccagagcgcaaggtgtcgtttgatttcttttggttatcatg 240

                                                                       
Query: 274 acctatgtgacaacagttt-actgttt-gat-cctaaggtcatgtcctaactctgttttg 330
           ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 241 acctatgtgacaacagttttactgttttgatacctaaggtcatgtcctaactctgttttg 300

                                                                       
Query: 331 cttcataggatcattgataagaggtttgtgttgtgtttgcttgcaattgcaacttctgtg 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcataggatcattgataagaggtttgtgttgtgtttgcttgcaattgcaacttctgtg 360

                                                                       
Query: 391 cagctggttttgactgaagcgggtattcatcttgctgtgactttggcttccagtatgcct 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagctggttttgactgaagcgggtattcatcttgctgtgactttggcttccagtatgcct 420

                                                                       
Query: 451 gtggttttgcttcatgcagttttgtgggctggatatgatgcctatgagattgagaatgtc 510
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtggttttgcttcatacagttttgtgggctggatatgatgcctatgagattgagaatgtc 480

                                                           
Query: 511 tctggtgcaggttatgaaagtgtagcgcagaatgaagatgctgtttga 558
           ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 481 tctggtgcaggttatgaaagtgtagcgcagaatgaagatgctgcttga 528