Miyakogusa Predicted Gene
- Lj1g3v2898440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2898440.1 tr|A8IMR7|A8IMR7_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_188842 PE=4
SV=1,34.57,3e-18,seg,NULL; Pro_isomerase,Cyclophilin-like
peptidyl-prolyl cis-trans isomerase domain;
PROKAR_LIPOPROT,CUFF.29654.1
(1017 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP046417 weakly similar to UniRef100_A2Q1W0 Cluster: Pe... 262 4e-69
gnl|LJGI|TC67127 similar to UniRef100_A7QZM3 Cluster: Chromosome... 119 4e-26
gnl|LJGI|TC59863 similar to UniRef100_A7QZM3 Cluster: Chromosome... 52 7e-06
>gnl|LJGI|BP046417 weakly similar to UniRef100_A2Q1W0 Cluster: Peptidyl-prolyl cis-trans
isomerase, cyclophilin type; n=1; Medicago
truncatula|Rep: Peptidyl-prolyl cis-trans isomerase,
cyclophilin type - Medicago truncatula (Barrel medic),
partial (13%)
Length = 517
Score = 262 bits (132), Expect = 4e-69
Identities = 132/132 (100%)
Strand = Plus / Minus
Query: 886 tctgaagatatggaaattttagagaaaattgctcagcttccaactaaatcagaggttttg 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tctgaagatatggaaattttagagaaaattgctcagcttccaactaaatcagaggttttg 458
Query: 946 agtaatattgatgtctctatcttggagagcccactttcattacggtttcggaggatttac 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 agtaatattgatgtctctatcttggagagcccactttcattacggtttcggaggatttac 398
Query: 1006 acagagtcttaa 1017
||||||||||||
Sbjct: 397 acagagtcttaa 386
>gnl|LJGI|TC67127 similar to UniRef100_A7QZM3 Cluster: Chromosome undetermined
scaffold_279, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_279,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 781
Score = 119 bits (60), Expect = 4e-26
Identities = 183/224 (81%)
Strand = Plus / Plus
Query: 496 ggagagggaattgttggtctggaaactgactatggaattcttcgaatgaaacttttgcct 555
|||||||||||| |||| |||||||||| ||||||| ||||| || |||||||| |||
Sbjct: 529 ggagagggaattattggattggaaactgaatatggaactcttcacataaaacttttccct 588
Query: 556 gagtgttctccagagtctgttgcctacattcttgagctgttggcattgcctcattgtgtt 615
|| ||| | || | ||||||||||||||||| || ||||||| |||| |||||||
Sbjct: 589 gactgtgcccccaactctgttgcctacattctagaattgttggctttgcaccattgtgca 648
Query: 616 ggttgccagatttatcgtgctgaaagccggggaaacttttgggactcagaaggaaaccat 675
|| ||||| |||| ||||| || ||||| ||| | | ||||| |||||||||||||||
Sbjct: 649 ggctgccaattttaccgtgcagagagccgaggacaatcatgggattcagaaggaaaccat 708
Query: 676 ataaagaaggctccatttggtcctccttttgcactaattcaagg 719
||||| || ||| |||||||||| |||| |||| ||||||||||
Sbjct: 709 ataaaaaatgcttcatttggtcccccttatgcattaattcaagg 752
Score = 52.0 bits (26), Expect = 7e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 353 catgggtgttttgtggagatagagaggcgtgtggacctagatttggtgagtgttggtt 410
|||||||||||||||| || | ||||| |||||| | | ||||||||||||||||||
Sbjct: 377 catgggtgttttgtgggaatcgtgaggcttgtggatccaaatttggtgagtgttggtt 434
>gnl|LJGI|TC59863 similar to UniRef100_A7QZM3 Cluster: Chromosome undetermined
scaffold_279, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_279,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 801
Score = 52.0 bits (26), Expect = 7e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 353 catgggtgttttgtggagatagagaggcgtgtggacctagatttggtgagtgttggtt 410
|||||||||||||||| || | ||||| |||||| | | ||||||||||||||||||
Sbjct: 412 catgggtgttttgtgggaatcgtgaggcttgtggatccaaatttggtgagtgttggtt 469