Miyakogusa Predicted Gene

Lj1g3v2897290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2897290.1 Non Chatacterized Hit- tr|I1N439|I1N439_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16382
PE,97.64,0,SNARE-like,Longin-like domain; Sedlin_N,Sedlin; no
description,NULL; UNCHARACTERIZED,NULL; MBP-1 INT,CUFF.29648.1
         (381 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68148 homologue to UniRef100_A7P8D6 Cluster: Chromoso...   714   0.0  

>gnl|LJGI|TC68148 homologue to UniRef100_A7P8D6 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 679

 Score =  714 bits (360), Expect = 0.0
 Identities = 374/381 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatcgtctgcgtcgccgtcgtcggccaccagaacaatccgctgtacatacagagcttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  atgatcgtctgcgtcgccgtcgtcggccaccagaacaatccgctgtacatacagagcttc 151

                                                                       
Query: 61  acggaggccgatgatgctctcaagctccaccacatcgtccattgctcgctcgatgtggtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 acggaggccgatgatgctctcaagctccaccacatcgtccattgctcgctcgatgtggtc 211

                                                                       
Query: 121 gacgagcgagtgaacaatcctaaaaaatctgggcctatgctgaatgagacgtttctggga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gacgagcgagtgaacaatcctaaaaaatctgggcctatgctgaatgagacgtttctggga 271

                                                                       
Query: 181 ctgctatatcctattgaaaattacaaagtttatggatatctgacgaatacaaaggtgaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctgctatatcctattgaaaattacaaagtttatggatatctgacgaatacaaaggtgaaa 331

                                                                       
Query: 241 tttatcttggtgaccacggatctggatgttaaagatgcagatgtaagaaannnnnnnaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||       |||
Sbjct: 332 tttatcttggtgaccacggatctggatgttaaagatgcagatgtaagaaatttttttaga 391

                                                                       
Query: 301 aggttccatgctgcatacgtagatgcagtttcaaatccattccatgtgccaggtaaaaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aggttccatgctgcatacgtagatgcagtttcaaatccattccatgtgccaggtaaaaag 451

                                
Query: 361 ataacctctagaacttatgca 381
           |||||||||||||||||||||
Sbjct: 452 ataacctctagaacttatgca 472