Miyakogusa Predicted Gene
- Lj1g3v2896050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2896050.1 tr|A2Q5W8|A2Q5W8_MEDTR Actin-binding FH2
OS=Medicago truncatula GN=MTR_7g080920 PE=4
SV=1,63.32,0,FH2,Actin-binding FH2; FORMIN-RELATED,NULL; Formin
homology 2 domain (FH2 domain),Actin-binding FH2;,CUFF.29639.1
(3207 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71816 similar to UniRef100_A2Q5W8 Cluster: Actin-bind... 1057 0.0
gnl|LJGI|DC597837 similar to UniRef100_A2Q5W8 Cluster: Actin-bin... 809 0.0
gnl|LJGI|TC76831 similar to UniRef100_A2Q5W8 Cluster: Actin-bind... 474 e-132
gnl|LJGI|DC598362 similar to UniRef100_Q99070 Cluster: Glycine-r... 111 3e-23
gnl|LJGI|TC62504 similar to UniRef100_A7QAW0 Cluster: Chromosome... 68 4e-10
gnl|LJGI|TC81872 similar to UniRef100_A7PLQ0 Cluster: Chromosome... 56 1e-06
gnl|LJGI|TC63379 similar to UniRef100_A7PLQ0 Cluster: Chromosome... 54 6e-06
>gnl|LJGI|TC71816 similar to UniRef100_A2Q5W8 Cluster: Actin-binding FH2; n=1; Medicago
truncatula|Rep: Actin-binding FH2 - Medicago truncatula
(Barrel medic), partial (16%)
Length = 814
Score = 1057 bits (533), Expect = 0.0
Identities = 533/533 (100%)
Strand = Plus / Plus
Query: 2675 aagacaaagacgcaaggtgcaggaagcttggcctacaagttgtatctagtctgagcacag 2734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagacaaagacgcaaggtgcaggaagcttggcctacaagttgtatctagtctgagcacag 60
Query: 2735 atctatcaaatgtgaagaaggctgctacaatggattctgaagttctcagcagcgatgtcc 2794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctatcaaatgtgaagaaggctgctacaatggattctgaagttctcagcagcgatgtcc 120
Query: 2795 ttaaactttccaaaggaattgcgaacactgcagaggttgttcagttaaaccaaactgtgg 2854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaaactttccaaaggaattgcgaacactgcagaggttgttcagttaaaccaaactgtgg 180
Query: 2855 cgggatcagatgaaaggactcagaaatttgctgcattcttgaacaattttattagaatgg 2914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgggatcagatgaaaggactcagaaatttgctgcattcttgaacaattttattagaatgg 240
Query: 2915 ctaaggaggaaactctgaagattcaagcccaagaaaatgttgctttgtcccttgtgaagg 2974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctaaggaggaaactctgaagattcaagcccaagaaaatgttgctttgtcccttgtgaagg 300
Query: 2975 agattactgagtattttcatggggacttggcaaaggaagaagctcatccattcagaatct 3034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agattactgagtattttcatggggacttggcaaaggaagaagctcatccattcagaatct 360
Query: 3035 tcatggttgtaagagactttttagcggttcttgaccgggtctgcaaagaagttgggatca 3094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcatggttgtaagagactttttagcggttcttgaccgggtctgcaaagaagttgggatca 420
Query: 3095 taaatgagagaaccatggttagttcagctcatacatttcctgttccagttaatcaaatgc 3154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaatgagagaaccatggttagttcagctcatacatttcctgttccagttaatcaaatgc 480
Query: 3155 ttccagaaccccttcctggattgcataaaaggcaagagtgtaataactaataa 3207
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttccagaaccccttcctggattgcataaaaggcaagagtgtaataactaataa 533
>gnl|LJGI|DC597837 similar to UniRef100_A2Q5W8 Cluster: Actin-binding FH2; n=1;
Medicago truncatula|Rep: Actin-binding FH2 - Medicago
truncatula (Barrel medic), partial (6%)
Length = 424
Score = 809 bits (408), Expect = 0.0
Identities = 420/424 (99%)
Strand = Plus / Plus
Query: 408 caacaaacacctccccgtcgccctctccgtcaccgcctgcgccgccgtcgctgtcgccgt 467
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 caacaaacacctccccgtcgccctgtccgtcaccgcctgcgccgccgtcgctgtcgccgt 60
Query: 468 cgtcgccttcatctactaccgccggcgcgtccgaaaccgccgcgacgccgccgacagcaa 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtcgccttcatctactaccgccggcgcgtccgaaaccgccgcgacgccgccgacagcaa 120
Query: 528 ggccttcagctccgacagcagcttcggactgttcccgcacaatgccgacattggagcccg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggccttcagctccgacagcagcttcggactgttcccgcacaatgccgacattggagcccg 180
Query: 588 cagctccgagttcctctacctcggcaccgtcgtgaactcgcgtggaatcgacgacgctcc 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagctccgagttcctctacctcggcaccgtcgtgaactcgcgtggaatcgacgacgctcc 240
Query: 648 acgtggcggcggcatggctgagacccggagaatggagtcgccggagctccggcctcttcc 707
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 241 acgtggcggcggcatggctgagacccggagaatggagtgggcggagctccggcctcttcc 300
Query: 708 gccgcttgcacgtctccctgcgcctccgttgcctgcccatagtgacgcgggttcggagga 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccgcttgcacgtctccctgcgcctccgttgcctgcccatagtgacgcgggttcggagga 360
Query: 768 ggaagacgaagagttttactcgccaagagggtcatccttgggtggccgtgagagctccat 827
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaagacgaaaagttttactcgccaagagggtcatccttgggtggccgtgagagctccat 420
Query: 828 cgga 831
||||
Sbjct: 421 cgga 424
>gnl|LJGI|TC76831 similar to UniRef100_A2Q5W8 Cluster: Actin-binding FH2; n=1; Medicago
truncatula|Rep: Actin-binding FH2 - Medicago truncatula
(Barrel medic), partial (32%)
Length = 1807
Score = 474 bits (239), Expect = e-132
Identities = 380/427 (88%)
Strand = Plus / Plus
Query: 2205 cttgttaaaaatggcaccaagcaaggaagaagagcgtaaactgaaggaacataaagacga 2264
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 473 cttgttaaaaatggcaccaagcaaggaagaagaacgtaaattgaaggaacataaagatga 532
Query: 2265 ctcatcaatcaaacttggtctggctgagaaatttttgaaggctgttcttgaagtaccttt 2324
||| ||| ||| ||||||| |||||||||||| ||||||| || |||| ||||||||
Sbjct: 533 ctctccaaccaagcttggtcctgctgagaaatttctgaaggcggtgcttggtgtaccttt 592
Query: 2325 cgcatttaaaagagttgcagcaatgctttacatggtcaattttgagtctgaagtggagta 2384
|||||||||||| |||| ||||||||||||||| | |||||||||||| |||||||| ||
Sbjct: 593 cgcatttaaaagggttgaagcaatgctttacatagccaattttgagtcagaagtggaata 652
Query: 2385 tcttaggaaatcatttcgaactctagaggctgcgtgtgaagagttgcgaaattgtagaat 2444
|||||||||||| |||| ||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 653 tcttaggaaatcctttcaaactctagaggttgcctgtgaagagttgcgaaacagtagaat 712
Query: 2445 gttcttgaagcttctacaggctgtacttaaaactgggaaccgcatgaatgtggggacaaa 2504
||| |||||||||||| | ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 713 gtttttgaagcttctagaagctgtgcttaaaaccgggaaccgcatgaatgtggggacaaa 772
Query: 2505 ccgcggcgatgcaaaggccttcaaacttgatacacttctcaagctggctgatgtcaaagg 2564
||| || ||||| | || ||||| || ||||||||||||||||||| ||||||||||||
Sbjct: 773 ccgtggtgatgctcacgcattcaagctcgatacacttctcaagctggttgatgtcaaagg 832
Query: 2565 ggcagatgggaaaaccactctactgcattttgttgtgcaggaaattattcgaactgaagg 2624
|| ||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||
Sbjct: 833 cgcggatgggaaaaccactctactgcactttgttgtgcaagaaatcattagaactgaagg 892
Query: 2625 tgctcgt 2631
||||||
Sbjct: 893 cgctcgt 899
Score = 212 bits (107), Expect = 1e-53
Identities = 358/441 (81%), Gaps = 3/441 (0%)
Strand = Plus / Plus
Query: 2734 gatctatcaaatgtgaagaaggctgctacaatggattctgaagttctcagcagcgatgtc 2793
|||||| ||||||| |||||| | ||| | ||||||||||||||||||||||| || |||
Sbjct: 993 gatctagcaaatgttaagaagtcggctgctatggattctgaagttctcagcagtgaagtc 1052
Query: 2794 cttaaactttccaaaggaattgcgaacactgcagaggttgttcagttaaaccaaactgtg 2853
|||||||||| ||||||||||| | || ||||| || || | || |||| |
Sbjct: 1053 tctaaactttcccaaggaattgcgcgaatcgcggaggtcgtgaagctgaatgaaac---g 1109
Query: 2854 gcgggatcagatgaaaggactcagaaatttgctgcattcttgaacaattttattagaatg 2913
||||| |||| ||||| | ||||||||| | | || ||||||| || || ||||||
Sbjct: 1110 gcggggtcaggcgaaagcaggcagaaattttcagaatcaatgaacaagttcatgagaatg 1169
Query: 2914 gctaaggaggaaactctgaagattcaagcccaagaaaatgttgctttgtcccttgtgaag 2973
||| |||| || | ||||| ||||||||||| |||| ||||| |||||||||||||||
Sbjct: 1170 gctgaggaagagattctgagaattcaagcccaggaaagcgttgcattgtcccttgtgaag 1229
Query: 2974 gagattactgagtattttcatggggacttggcaaaggaagaagctcatccattcagaatc 3033
|||||||| |||||||| |||||| ||||| | |||||||||||||||||||| ||||||
Sbjct: 1230 gagattacagagtatttccatgggaacttgtccaaggaagaagctcatccatttagaatc 1289
Query: 3034 ttcatggttgtaagagactttttagcggttcttgaccgggtctgcaaagaagttgggatc 3093
|||||||| || |||||||| ||| | ||||| || ||||| ||||||||||| || ||
Sbjct: 1290 ttcatggtagtgagagacttcttaacagttctcgatcgggtttgcaaagaagtcggcatg 1349
Query: 3094 ataaatgagagaaccatggttagttcagctcatacatttcctgttccagttaatcaaatg 3153
||||| ||| |||||||||| ||||| || || | ||| ||||||||||| || | |||
Sbjct: 1350 ataaacgagcgaaccatggtgagttctgcacacagattccctgttccagtgaaccctatg 1409
Query: 3154 cttccagaaccccttcctgga 3174
|||||| |||| |||||||||
Sbjct: 1410 cttccacaaccacttcctgga 1430
>gnl|LJGI|DC598362 similar to UniRef100_Q99070 Cluster: Glycine-rich RNA-binding
protein 2; n=1; Sorghum bicolor|Rep: Glycine-rich
RNA-binding protein 2 - Sorghum bicolor (Sorghum)
(Sorghum vulgare), partial (18%)
Length = 203
Score = 111 bits (56), Expect = 3e-23
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 1 atgctaaccctcttgttctccttgttctgtttcctcttctcctccaaaacttttgt 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atgctaaccctcttgttctccttgttctgtttcctcttctcctccaaaacttttgt 59
Score = 101 bits (51), Expect = 3e-20
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 104 gaagaatcctccatgaaccctttatgccattgaacacccaacctccatctg 154
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gaagaatcctccatgaaccctttatgccattgaacacccaacctccatctg 157
>gnl|LJGI|TC62504 similar to UniRef100_A7QAW0 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 1026
Score = 67.9 bits (34), Expect = 4e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 2971 aaggagattactgagtattttcatggggacttggcaaaggaagaagctcatccattcaga 3030
|||||||| ||| ||||||| ||||| | | ||||||||||||||||||||||| |||
Sbjct: 429 aaggagataactcagtatttccatggaaattcagcaaaggaagaagctcatccatttaga 488
Query: 3031 atcttcatggttgt 3044
||||| ||||||||
Sbjct: 489 atctttatggttgt 502
>gnl|LJGI|TC81872 similar to UniRef100_A7PLQ0 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 660
Score = 56.0 bits (28), Expect = 1e-06
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 3003 ggcaaaggaagaagctcatccattcagaatcttcatggttgtaagagacttt 3054
|||||| |||||||| || || |||||||| |||||| ||||||||||||||
Sbjct: 14 ggcaaaagaagaagcgcaccctttcagaattttcatgattgtaagagacttt 65
>gnl|LJGI|TC63379 similar to UniRef100_A7PLQ0 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 826
Score = 54.0 bits (27), Expect = 6e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 3004 gcaaaggaagaagctcatccattcagaatcttcatggttgtaagagacttt 3054
|||||||||||||| || || |||||||| || ||| ||||||||||||||
Sbjct: 221 gcaaaggaagaagcccaccctttcagaatttttatgattgtaagagacttt 271