Miyakogusa Predicted Gene
- Lj1g3v2883910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2883910.1 Non Chatacterized Hit- tr|I3T359|I3T359_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=3
SV=1,100,0,Cytochrom_C,Cytochrome c, class I; Cytochrome c,Cytochrome
c domain; CYTC,Cytochrome c domain; CYTCH,CUFF.29631.1
(345 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62230 homologue to UniRef100_A7PPW4 Cluster: Chromoso... 684 0.0
gnl|LJGI|TC62353 homologue to UniRef100_P62772 Cluster: Cytochro... 333 4e-91
gnl|LJGI|BP064293 homologue to UniRef100_P00062 Cluster: Cytochr... 258 2e-68
gnl|LJGI|AW719444 similar to UniRef100_P00051 Cluster: Cytochrom... 168 1e-41
>gnl|LJGI|TC62230 homologue to UniRef100_A7PPW4 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 715
Score = 684 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus
Query: 1 atggcgacattcgatgaggcaccacccggagacaccaaggctggcgagaagatcttcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atggcgacattcgatgaggcaccacccggagacaccaaggctggcgagaagatcttcaag 122
Query: 61 atcaagtgcgctcagtgccacaccgtcgaccaaggtgccggccacaaacaaggacccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atcaagtgcgctcagtgccacaccgtcgaccaaggtgccggccacaaacaaggacccaat 182
Query: 121 ctgaatggtttgtttggaaggcaatctggcacaactcctggatattcctattctgcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ctgaatggtttgtttggaaggcaatctggcacaactcctggatattcctattctgcagct 242
Query: 181 aacaagaacatggctgtgatttgggaggagaagaccttgtatgattacttgcttaacccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aacaagaacatggctgtgatttgggaggagaagaccttgtatgattacttgcttaacccc 302
Query: 241 aaaaagtacattccagggacgaagatggtgtttcctggtctcaagaagccacaggatcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaaaagtacattccagggacgaagatggtgtttcctggtctcaagaagccacaggatcgt 362
Query: 301 gctgatctgattgcatatctgaaacaatccactgcgcaatgattg 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gctgatctgattgcatatctgaaacaatccactgcgcaatgattg 407
>gnl|LJGI|TC62353 homologue to UniRef100_P62772 Cluster: Cytochrome c; n=2;
Brassica|Rep: Cytochrome c - Brassica napus (Rape),
complete
Length = 685
Score = 333 bits (168), Expect = 4e-91
Identities = 285/324 (87%)
Strand = Plus / Plus
Query: 1 atggcgacattcgatgaggcaccacccggagacaccaaggctggcgagaagatcttcaag 60
|||||| | ||||||||||| || ||||| || ||||| || |||||||||||||||
Sbjct: 94 atggcgtcgttcgatgaggctcctcccggcaactccaagagcggtgagaagatcttcaag 153
Query: 61 atcaagtgcgctcagtgccacaccgtcgaccaaggtgccggccacaaacaaggacccaat 120
| ||||||||||||||||||||||| || |||| ||||| ||||||||||||||||||
Sbjct: 154 ttgaagtgcgctcagtgccacaccgttgagaaaggcgccggtcacaaacaaggacccaat 213
Query: 121 ctgaatggtttgtttggaaggcaatctggcacaactcctggatattcctattctgcagct 180
||||| ||||||||||||||||| || || || ||| ||||||||||||| |||||||||
Sbjct: 214 ctgaacggtttgtttggaaggcagtcaggaactactgctggatattcctactctgcagct 273
Query: 181 aacaagaacatggctgtgatttgggaggagaagaccttgtatgattacttgcttaacccc 240
||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 274 aacaagaacatggctgtgaattgggaggagaagactttgtacgattacttgcttaaccct 333
Query: 241 aaaaagtacattccagggacgaagatggtgtttcctggtctcaagaagccacaggatcgt 300
|||||||| ||||||||||| |||||||| ||||||||||| |||||||| || || |||
Sbjct: 334 aaaaagtatattccagggacaaagatggtatttcctggtcttaagaagccccaagaacgt 393
Query: 301 gctgatctgattgcatatctgaaa 324
|||||||| ||||| || ||||||
Sbjct: 394 gctgatcttattgcgtacctgaaa 417
>gnl|LJGI|BP064293 homologue to UniRef100_P00062 Cluster: Cytochrome c; n=1; Sambucus
nigra|Rep: Cytochrome c - Sambucus nigra (European
elder), partial (68%)
Length = 505
Score = 258 bits (130), Expect = 2e-68
Identities = 193/214 (90%)
Strand = Plus / Minus
Query: 111 aggacccaatctgaatggtttgtttggaaggcaatctggcacaactcctggatattccta 170
||||||||||||||| ||||||||||||||||| || || || ||| |||||||||||||
Sbjct: 422 aggacccaatctgaacggtttgtttggaaggcagtcaggaactactgctggatattccta 363
Query: 171 ttctgcagctaacaagaacatggctgtgatttgggaggagaagaccttgtatgattactt 230
|||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||
Sbjct: 362 ctctgcagctaacaagaacatggctgtgaattgggaggagaagactttgtacgattactt 303
Query: 231 gcttaaccccaaaaagtacattccagggacgaagatggtgtttcctggtctcaagaagcc 290
||||||||| |||||||| ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 302 gcttaaccctaaaaagtatattccagggacaaagatggtatttcctggtcttaagaagcc 243
Query: 291 acaggatcgtgctgatctgattgcatatctgaaa 324
|| || ||||||||||| ||||| || ||||||
Sbjct: 242 ccaagaacgtgctgatcttattgcgtacctgaaa 209
>gnl|LJGI|AW719444 similar to UniRef100_P00051 Cluster: Cytochrome c; n=1; Cucurbita
maxima|Rep: Cytochrome c - Cucurbita maxima (Pumpkin)
(Winter squash), partial (24%)
Length = 150
Score = 168 bits (85), Expect = 1e-41
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 atggcgacattcgatgaggcaccacccggagacaccaaggctggcgagaagatcttcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 atggcgacattcgatgaggcaccacccggagacaccaaggctggcgagaagatcttcaag 125
Query: 61 atcaagtgcgctcagtgccacaccg 85
|||||||||||||||||||||||||
Sbjct: 126 atcaagtgcgctcagtgccacaccg 150