Miyakogusa Predicted Gene

Lj1g3v2862520.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2862520.2 tr|F4J9G6|F4J9G6_ARATH LETM1-like protein
OS=Arabidopsis thaliana GN=At3g59820 PE=4
SV=1,70.31,7e-18,EF-hand,NULL; EF_HAND_2,EF-HAND 2; no
description,EF-hand-like domain,CUFF.29621.2
         (273 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77886 similar to UniRef100_A7QAX6 Cluster: Chromosome...   206   5e-53

>gnl|LJGI|TC77886 similar to UniRef100_A7QAX6 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (3%)
          Length = 485

 Score =  206 bits (104), Expect = 5e-53
 Identities = 104/104 (100%)
 Strand = Plus / Plus

                                                                       
Query: 170 gcaatctctccaaggatagcgatgggaaaatattggtggaagacattgtcagattgggca 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gcaatctctccaaggatagcgatgggaaaatattggtggaagacattgtcagattgggca 61

                                                       
Query: 230 tccagaaagaagatgccgatgcagaggaagtaaggagatcttag 273
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tccagaaagaagatgccgatgcagaggaagtaaggagatcttag 105