Miyakogusa Predicted Gene

Lj1g3v2842390.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2842390.1 Non Chatacterized Hit- tr|I1L673|I1L673_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52547 PE,53.7,0,COHESIN
SUBUNIT RAD21,NULL; SCC1 / RAD21 FAMILY MEMBER,NULL; no
description,Rad21/Rec8-like protein,,CUFF.29694.1
         (3831 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72614 similar to UniRef100_A7R1G0 Cluster: Chromosome...   351   2e-95

>gnl|LJGI|TC72614 similar to UniRef100_A7R1G0 Cluster: Chromosome undetermined
            scaffold_351, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_351, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (5%)
          Length = 563

 Score =  351 bits (177), Expect = 2e-95
 Identities = 177/177 (100%)
 Strand = Plus / Plus

                                                                        
Query: 3655 aggaagaacctgaaacttgacaatatattggctggtaaaacaaggaaggaagcatcaagg 3714
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aggaagaacctgaaacttgacaatatattggctggtaaaacaaggaaggaagcatcaagg 60

                                                                        
Query: 3715 atgttttttgaaacactggttctcaagacaagggattatgttcatgtagaacaggcagag 3774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atgttttttgaaacactggttctcaagacaagggattatgttcatgtagaacaggcagag 120

                                                                     
Query: 3775 ccatatgacaatattgacttaaaacctagaccgaagcttatgaaggcagatttctga 3831
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ccatatgacaatattgacttaaaacctagaccgaagcttatgaaggcagatttctga 177