Miyakogusa Predicted Gene
- Lj1g3v2840270.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2840270.2 Non Chatacterized Hit- tr|I1L681|I1L681_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56586
PE,83.87,0,seg,NULL; no description,Peptide chain release factor;
prfB: peptide chain release factor 2,Peptide ,CUFF.29595.2
(1386 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS336674 similar to UniRef100_A7PV36 Cluster: Chromosom... 1231 0.0
gnl|LJGI|BP055441 similar to UniRef100_A7PV36 Cluster: Chromosom... 178 6e-44
gnl|LJGI|TC77132 similar to UniRef100_A7PV36 Cluster: Chromosome... 90 4e-17
gnl|LJGI|TC67489 homologue to UniRef100_A7NZ61 Cluster: Chromoso... 82 1e-14
>gnl|LJGI|FS336674 similar to UniRef100_A7PV36 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 621
Score = 1231 bits (621), Expect = 0.0
Identities = 621/621 (100%)
Strand = Plus / Plus
Query: 2 tggaggttgttacgcagcctctgtgcaccaccaccaccgccgccattgtaaccgccaaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaggttgttacgcagcctctgtgcaccaccaccaccgccgccattgtaaccgccaaaa 60
Query: 62 gcttcaggcgtaaacaaccacttctcattcctcaaaaccccacttatccttcaaagcatt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttcaggcgtaaacaaccacttctcattcctcaaaaccccacttatccttcaaagcatt 120
Query: 122 ttcccttccgcaccacactttcttctccttcccgttttcctccaccacctgttgtgtctg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcccttccgcaccacactttcttctccttcccgttttcctccaccacctgttgtgtctg 180
Query: 182 ccgcgccggagaaccagttgagcgttggggaaggggaggatactgatacaactgaatggg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgcgccggagaaccagttgagcgttggggaaggggaggatactgatacaactgaatggg 240
Query: 242 cacttcaagctttttattccctgaggaaggatgttgaaattacgtctcagcgtgttgaag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacttcaagctttttattccctgaggaaggatgttgaaattacgtctcagcgtgttgaag 300
Query: 302 aaataagagaatcttctggtatacaactattggagcaagagcttgccaatttggaggaga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaataagagaatcttctggtatacaactattggagcaagagcttgccaatttggaggaga 360
Query: 362 aagcatctgctacctccttttgggacaatcgagccaaagctcaagagactctttcgacat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagcatctgctacctccttttgggacaatcgagccaaagctcaagagactctttcgacat 420
Query: 422 tgtctgatgtcaaagataagattaacttgcttgctgagttcaaaacccaggttgaggatg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtctgatgtcaaagataagattaacttgcttgctgagttcaaaacccaggttgaggatg 480
Query: 482 cagaaacaatagttaagctgaccgaggaaatggaatcatccattgatagagcgcttcttg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagaaacaatagttaagctgaccgaggaaatggaatcatccattgatagagcgcttcttg 540
Query: 542 aggaggctactagtcttattaaagaactgaataaatcactagatcgatttgagctgactc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggaggctactagtcttattaaagaactgaataaatcactagatcgatttgagctgactc 600
Query: 602 aacttctttctggaccttatg 622
|||||||||||||||||||||
Sbjct: 601 aacttctttctggaccttatg 621
>gnl|LJGI|BP055441 similar to UniRef100_A7PV36 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 381
Score = 178 bits (90), Expect = 6e-44
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1297 tctgttatggacggcgagttggaccccttcatcaaatcttacctcaaacacaagttcagc 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgttatggacggcgagttggaccccttcatcaaatcttacctcaaacacaagttcagc 322
Query: 1357 atgacaatgtctacaagtggtgtcaactaa 1386
||||||||||||||||||||||||||||||
Sbjct: 321 atgacaatgtctacaagtggtgtcaactaa 292
>gnl|LJGI|TC77132 similar to UniRef100_A7PV36 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 523
Score = 89.7 bits (45), Expect = 4e-17
Identities = 79/89 (88%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 993 aggtggaaaaggaggtcagaatgtgaacaaggttgaaactgcagtccgaattacacacat 1052
|||||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||
Sbjct: 175 aggtggaaaaggaggtcagactgtgaacaaagttgaaactgcacttcgaattacacaca- 233
Query: 1053 cccaaccggtgtcactcttcgctgcacag 1081
||||| ||||||||| ||| ||| ||||
Sbjct: 234 accaactggtgtcactattcactgaacag 262
>gnl|LJGI|TC67489 homologue to UniRef100_A7NZ61 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (39%)
Length = 922
Score = 81.8 bits (41), Expect = 1e-14
Identities = 92/109 (84%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 965 aggacctggaaattagtttttccc-----gagcaggtggaaaaggaggtcagaatgtgaa 1019
|||||||||||||||||||||| ||| ||||||||||||||| |||| |||| |
Sbjct: 706 aggacctggaaattagtttttcaattcaagagaaggtggaaaaggaggccagattgtgga 765
Query: 1020 caaggttgaaactgcagtccgaattacacacatcccaaccggtgtcact 1068
||| ||||||| |||||| | ||||||||||| || |||||||||||||
Sbjct: 766 caaagttgaaattgcagttcaaattacacacaaccaaaccggtgtcact 814