Miyakogusa Predicted Gene

Lj1g3v2823900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2823900.1 tr|Q6EJD1|Q6EJD1_PUEML Isopentenyl pyrophosphate
isomerase OS=Pueraria montana var. lobata GN=Ipi
PE,77.01,0,IPP_isom_1: isopentenyl-diphosphate
delta-isomeras,Isopentenyl-diphosphate delta-isomerase, type 1;
,CUFF.29569.1
         (540 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58399 homologue to UniRef100_Q6EJD1 Cluster: Isopente...   751   0.0  

>gnl|LJGI|TC58399 homologue to UniRef100_Q6EJD1 Cluster: Isopentenyl pyrophosphate
           isomerase; n=1; Pueraria montana var. lobata|Rep:
           Isopentenyl pyrophosphate isomerase - Pueraria lobata
           (Kudzu vine), partial (77%)
          Length = 1275

 Score =  751 bits (379), Expect = 0.0
 Identities = 379/379 (100%)
 Strand = Plus / Plus

                                                                       
Query: 122 cggtgaagaaccacaaccacaaccctctcgtcgcgtctctctcttcccacaccgccatgg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cggtgaagaaccacaaccacaaccctctcgtcgcgtctctctcttcccacaccgccatgg 221

                                                                       
Query: 182 gtcaaactcccaccgccgctgatgccggcatggacgccgtccagcgccgcctcatgttcg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gtcaaactcccaccgccgctgatgccggcatggacgccgtccagcgccgcctcatgttcg 281

                                                                       
Query: 242 acgacgaatgcattttagtggatgagaatgaccgtgtggttggtcatgacagcaaataca 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 acgacgaatgcattttagtggatgagaatgaccgtgtggttggtcatgacagcaaataca 341

                                                                       
Query: 302 attgtcacttgatggaaaagattgaatctgaaaatttgctgcatagagctttcagtgtat 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 attgtcacttgatggaaaagattgaatctgaaaatttgctgcatagagctttcagtgtat 401

                                                                       
Query: 362 tcctgttcaactcaaagtatgagttacttcttcagcaacgatctgcaacaaaggtgacat 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcctgttcaactcaaagtatgagttacttcttcagcaacgatctgcaacaaaggtgacat 461

                                                                       
Query: 422 ttcctcttgtgtggacaaacacctgctgcagccatccactgcaccgtgaatctgagctta 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttcctcttgtgtggacaaacacctgctgcagccatccactgcaccgtgaatctgagctta 521

                              
Query: 482 ttgaggagaattcccttgg 500
           |||||||||||||||||||
Sbjct: 522 ttgaggagaattcccttgg 540



 Score =  127 bits (64), Expect = 8e-29
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgaaggccttgatcggcgtgacgctgagccagcaagtgttgtttaaaaggagcaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41  atggcgaaggccttgatcggcgtgacgctgagccagcaagtgttgtttaaaaggagcaat 100

               
Query: 61  tcca 64
           ||||
Sbjct: 101 tcca 104