Miyakogusa Predicted Gene
- Lj1g3v2822820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2822820.1 Non Chatacterized Hit- tr|K3YMC7|K3YMC7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si015406,23.97,3e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.29561.1
(2205 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP041405 weakly similar to UniRef100_A7QFV5 Cluster: Ch... 1068 0.0
>gnl|LJGI|BP041405 weakly similar to UniRef100_A7QFV5 Cluster: Chromosome undetermined
scaffold_89, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_89, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 546
Score = 1068 bits (539), Expect = 0.0
Identities = 546/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Plus
Query: 286 attctgcctaatatcttgacttgtaactttctcctcaaccggttggttggacatggtaaa 345
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attctgcctaatatct-gacttgtaactttctcctcaaccggttggttggacatggtaaa 59
Query: 346 gtggagatggtcctggcaatttatgagcagctcaagaggcttggtttgagccctaatcat 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gtggagatggtcctggcaatttatgagcagctcaagaggcttggtttgagccctaatcat 119
Query: 406 tacacctatgccattgtcatgaaggcgctgtataggaaaggtgatgtggttcatgtgttt 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tacacctatgccattgtcatgaaggcgctgtataggaaaggtgatgtggttcatgtgttt 179
Query: 466 caagaaatggaggaagctggggtgactcctgattcctattgtaatgcagttttaattgag 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 caagaaatggaggaagctggggtgactcctgattcctattgtaatgcagttttaattgag 239
Query: 526 ggcctctgcaaaaatcataggtctgattggggatatcagtttctccaagaatttagaaag 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggcctctgcaaaaatcataggtctgattggggatatcagtttctccaagaatttagaaag 299
Query: 586 gtgaatgctcccatagaggtttatgcttacaccgctgttattcacgggttttgtaatgaa 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtgaatgctcccatagaggtttatgcttacaccgctgttattcacgggttttgtaatgaa 359
Query: 646 atgaaattagatgaagctgagagtgttgttttggacatggaaaggcaggggttggttcct 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atgaaattagatgaagctgagagtgttgttttggacatggaaaggcaggggttggttcct 419
Query: 706 gatgtgaatatttattctgcattgatctgtggttattgtaagagtcataatctgcccaga 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gatgtgaatatttattctgcattgatctgtggttattgtaagagtcataatctgcccaga 479
Query: 766 gctttagacttatatgctgacatgatttcaaagggtataaaaacaaattgtgtacttgtt 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gctttagacttatatgctgacatgatttcaaagggtataaaaacaaattgtgtacttgtt 539
Query: 826 agcaaca 832
|||||||
Sbjct: 540 agcaaca 546