Miyakogusa Predicted Gene
- Lj1g3v2809160.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2809160.2 Non Chatacterized Hit- tr|I3SMN6|I3SMN6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.57,0,UPF0016,Uncharacterised protein family UPF0016;
TRANSMEMBRANE PROTEIN HTP-1 RELATED,Uncharacterised ,CUFF.29528.2
(840 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58464 homologue to UniRef100_A7PV91 Cluster: Chromoso... 1624 0.0
gnl|LJGI|BP046274 similar to UniRef100_A7PV91 Cluster: Chromosom... 408 e-113
gnl|LJGI|DC595120 268 5e-71
>gnl|LJGI|TC58464 homologue to UniRef100_A7PV91 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1452
Score = 1624 bits (819), Expect = 0.0
Identities = 833/840 (99%)
Strand = Plus / Plus
Query: 1 atggcgctgcgcttcaacgatcgcagaaccaccgctctcgcaattctcctctgcttcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atggcgctgcgcttcaacgatcgcagaaccaccgctctcgcaattctcctctgcttcctc 305
Query: 61 ttccacctctcgccgacactcgctcaggattctctggctcagatcggtggatctgtggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttccacctctcgccgacactcgctcaggattctctggctcagatcggtggatctgtggat 365
Query: 121 ctcggtcgccgcggcaaagttatgttgcatcataatgcttcagtcatttctattggcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ctcggtcgccgcggcaaagttatgttgcatcataatgcttcagtcatttctattggcttg 425
Query: 181 gattccactggtgttggactctttgatgcnnnnnnngccagtctatcaatgatccttgtc 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 426 gattccactggtgttggactctttgatgctttttttgccagtctatcaatgatccttgtc 485
Query: 241 agtgagattggggatgagacatttataatagcagctcttatggctatgcgtcaccctaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agtgagattggggatgagacatttataatagcagctcttatggctatgcgtcaccctaag 545
Query: 301 tcgattgtgttgtctggtgcactcagtgccctgattataatgacagtactttctacagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcgattgtgttgtctggtgcactcagtgccctgattataatgacagtactttctacagga 605
Query: 361 ctaggaaggattgtgccaaatttgatttcgaagaagcatacaaatagtgctgctacagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ctaggaaggattgtgccaaatttgatttcgaagaagcatacaaatagtgctgctacagtt 665
Query: 421 ctttatgctttctttgggttacgattgctgtacattgcgtggagatcatcagattcaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctttatgctttctttgggttacgattgctgtacattgcgtggagatcatcagattcaaaa 725
Query: 481 acttcacagaagaaagaaatggaagaagttgaagagaaacttgaaggtggacaaggaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 acttcacagaagaaagaaatggaagaagttgaagagaaacttgaaggtggacaaggaaaa 785
Query: 541 acttcatttcgacggttcttttcaagattttgcacaccaatatttttggagtcttttatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 acttcatttcgacggttcttttcaagattttgcacaccaatatttttggagtcttttatt 845
Query: 601 ttaacattccttgctgagtggggtgatcgcagccagattgcgacaattgcactggcaacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 ttaacattccttgctgagtggggtgatcgcagccagattgcgacaattgcactggcaacc 905
Query: 661 cacaaaaatgcgctgggagtggcggtcggggctactataggacacaccatctgtacttct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 cacaaaaatgcgctgggagtggcggtcggggctactataggacacaccatctgtacttct 965
Query: 721 gtggcagtggtggggggaagcatgctggcatctaagatttcccagcgcacagtggccaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 gtggcagtggtggggggaagcatgctggcatctaagatttcccagcgcacagtggccaca 1025
Query: 781 gttggtggtttgctcttcctcggcttttcagtgtcttcatactactaccctcctctataa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 gttggtggtttgctcttcctcggcttttcagtgtcttcatactactaccctcctctataa 1085
>gnl|LJGI|BP046274 similar to UniRef100_A7PV91 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 487
Score = 408 bits (206), Expect = e-113
Identities = 293/318 (92%), Gaps = 3/318 (0%)
Strand = Plus / Minus
Query: 519 acttgaaggtggacaaggaaaaacttcatttcgacggttcttttcaagattttgcacacc 578
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 487 acttgaaggtggaccaggaaaaacttcatttcgacgggtcttttcaagattttgcacacc 428
Query: 579 aatatttttggagtcttttattttaacattccttgctgagtggggtgatcgcagccagat 638
||| |||||||||||||||||||||| ||| ||||||||||||||||||| ||| |||
Sbjct: 427 cataattttggagtcttttattttaaccatccctgctgagtggggtgatcgccgcccgat 368
Query: 639 tgcgacaattgcactggcaacccacaaaaat-gcgctgggagtggcggtcggggctacta 697
|||||| ||||||||||| |||| | |||| |||||||| ||||||||||||||||||
Sbjct: 367 tgcgaccattgcactggccacccccccaaatagcgctggggatggcggtcggggctacta 308
Query: 698 taggacacaccatctgtacttctgtggcagtggtggggggaagca-tgctggcatctaag 756
||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 307 taggacacaccctctgtacttctgtggccctggtggggggaagcactgctggcatctaag 248
Query: 757 atttcccagcgcacagtggcca-cagttggtggtttgctcttcctcggcttttcagtgtc 815
||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 247 atttccccgcgcaccgtggccacccgttggtggtttgctcttcctcggcttttcagtgtc 188
Query: 816 ttcatactactaccctcc 833
||||||||||||||||||
Sbjct: 187 ttcatactactaccctcc 170
>gnl|LJGI|DC595120
Length = 345
Score = 268 bits (135), Expect = 5e-71
Identities = 171/183 (93%)
Strand = Plus / Plus
Query: 27 aaccaccgctctcgcaattctcctctgcttcctcttccacctctcgccgacactcgctca 86
||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| | |
Sbjct: 162 aaccaccgctctcgcaattctgctctgctttctcttccacctctagccgacactcggtta 221
Query: 87 ggattctctggctcagatcggtggatctgtggatctcggtcgccgcggcaaagttatgtt 146
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ggattctctggatcagatgggtggatctgtggatctcggtcgccgcggcaaagttatgtt 281
Query: 147 gcatcataatgcttcagtcatttctattggcttggattccactggtgttggactctttga 206
||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 282 gcatcgcaatgcttcagtcatttctattggcttggattccacgggggctggactctttga 341
Query: 207 tgc 209
|||
Sbjct: 342 tgc 344