Miyakogusa Predicted Gene
- Lj1g3v2741280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2741280.1 Non Chatacterized Hit- tr|I1N3T9|I1N3T9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56343
PE,87.76,0,Pectate_lyase_3,NULL; Pectin lyase-like,Pectin lyase
fold/virulence factor; SUBFAMILY NOT NAMED,NULL,CUFF.29546.1
(774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57648 similar to UniRef100_Q84LI7 Cluster: Polygalact... 642 0.0
gnl|LJGI|DC596068 similar to UniRef100_Q84LI7 Cluster: Polygalac... 492 e-138
gnl|LJGI|TC67181 similar to UniRef100_Q2HUV5 Cluster: Glycoside ... 82 6e-15
gnl|LJGI|GO012331 similar to UniRef100_A7QNJ7 Cluster: Chromosom... 76 4e-13
gnl|LJGI|TC63331 similar to UniRef100_A7QNJ7 Cluster: Chromosome... 76 4e-13
gnl|LJGI|TC65908 similar to UniRef100_A7QNJ7 Cluster: Chromosome... 68 9e-11
>gnl|LJGI|TC57648 similar to UniRef100_Q84LI7 Cluster: Polygalacturonase-like
protein; n=1; Fragaria x ananassa|Rep:
Polygalacturonase-like protein - Fragaria ananassa
(Strawberry), partial (86%)
Length = 1557
Score = 642 bits (324), Expect = 0.0
Identities = 606/699 (86%), Gaps = 2/699 (0%)
Strand = Plus / Plus
Query: 76 ctgagttcagagagaggtgagagcagaaaagcaaaaattgtgaccacttcctttgagtac 135
||||||||||| || ||||||||||||| | |||| || ||||| || |||| ||||
Sbjct: 116 ctgagttcagatgtagctgagagcagaaaatccaaaacagtcaccacatcatttgtgtac 175
Query: 136 agtgctataaactgcagagcacacagtgcttcattgacagattttggtggtgttggtgat 195
||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 176 agtgctataaactgcagagcacatagtgcttcattgacagattttggtggtattggggat 235
Query: 196 ggaaagacatcaaacacaaaggcatttcaatctgcagtcagtcacctgagtcagtatgct 255
||||||||||| || |||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 236 ggaaagacatctaatacaaaggcctttcaatctgcaatcagtcacctgagtcagtatgct 295
Query: 256 tctcaaggtggttctcagctctatgttcctgcaggaaaatggctcactggaagtttcagc 315
||| |||| || ||||| | ||||||||||| || |||||||| ||||| || |||||
Sbjct: 296 tctaaaggaggggctcagttgtatgttcctgctgggaaatggcttactgggagcttcagt 355
Query: 316 ctcaccagtcacttcaccctctatcttgacaaagaggctgttctccttgcttctcaggat 375
|| ||||| |||||||| || || || ||||||| ||||||||||||||||||||| ||
Sbjct: 356 cttaccagccacttcacactttacctcaacaaagatgctgttctccttgcttctcagaat 415
Query: 376 atcactgagtggcctgtgcttggacccctcccatcttacggtagaggaagagatgcacca 435
|| | ||||||||||||| ||| ||| |||||||| ||||||||||||||||| ||| ||
Sbjct: 416 attagtgagtggcctgtgattgaaccactcccatcctacggtagaggaagagacgcagca 475
Query: 436 gcaggaaggtacaccagcctcatatttggaacaaacctcactgatgttattgtcacagga 495
|||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gcaggaagatatactagcctcatatttggaacaaacctcactgatgttattgtcacaggg 535
Query: 496 gataatggcaccattgatggtcagggtgcgttttggtggcaacaatttcacagaaaaaag 555
|||||||||||||| ||||||||||| || ||||||||||| ||||||||| ||||||
Sbjct: 536 gataatggcaccatagatggtcagggagcattttggtggcagaaatttcacaagaaaaag 595
Query: 556 ttgaagtacactcggccgtacctgattgaattaatgttctcagacagcattcaaatctca 615
|||||||||||||| |||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 596 ttgaagtacactcgcccgtacctgattgagttgatgttctcagacagcattcagatctcc 655
Query: 616 aatctaactctccttaattccccaaattggaatgttcatcctgtttacagcagcaatatt 675
|||||||| || || | | |||| |||||||| ||||||||||| ||||||||||||
Sbjct: 656 aatctaacgcttctga--ttcccatcatggaatgtccatcctgtttatagcagcaatatt 713
Query: 676 attgtgaaaggcatcaccataattgctcctgtgacgtctccaaacacagatggcatcaac 735
|| | |||||||| ||||| || |||||||| || || || ||||| ||||||||||||
Sbjct: 714 ataattaaaggcataaccattatcgctcctgtcacatcccctaacactgatggcatcaac 773
Query: 736 ccagattcctgcacaaatgtaaagattgaagactgctac 774
|||||||| || |||||| | |||||||||||||||
Sbjct: 774 ccagattcttgtacaaataccagaattgaagactgctac 812
>gnl|LJGI|DC596068 similar to UniRef100_Q84LI7 Cluster: Polygalacturonase-like
protein; n=1; Fragaria x ananassa|Rep:
Polygalacturonase-like protein - Fragaria ananassa
(Strawberry), partial (38%)
Length = 550
Score = 492 bits (248), Expect = e-138
Identities = 251/252 (99%)
Strand = Plus / Plus
Query: 523 gcgttttggtggcaacaatttcacagaaaaaagttgaagtacactcggccgtacctgatt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgttttggtggcaacaatttcacagaaaaaagttgaagtacactcggccgtacctgatt 60
Query: 583 gaattaatgttctcagacagcattcaaatctcaaatctaactctccttaattccccaaat 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaattaatgttctcagacagcattcaaatctcaaatctaactctccttaattccccaaat 120
Query: 643 tggaatgttcatcctgtttacagcagcaatattattgtgaaaggcatcaccataattgct 702
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 tggaatgttcatcctgtttacagcagcgatattattgtgaaaggcatcaccataattgct 180
Query: 703 cctgtgacgtctccaaacacagatggcatcaacccagattcctgcacaaatgtaaagatt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctgtgacgtctccaaacacagatggcatcaacccagattcctgcacaaatgtaaagatt 240
Query: 763 gaagactgctac 774
||||||||||||
Sbjct: 241 gaagactgctac 252
>gnl|LJGI|TC67181 similar to UniRef100_Q2HUV5 Cluster: Glycoside hydrolase, family
28; n=1; Medicago truncatula|Rep: Glycoside hydrolase,
family 28 - Medicago truncatula (Barrel medic), partial
(33%)
Length = 624
Score = 81.8 bits (41), Expect = 6e-15
Identities = 92/109 (84%)
Strand = Plus / Plus
Query: 128 ttgagtacagtgctataaactgcagagcacacagtgcttcattgacagattttggtggtg 187
|||||||| |||||| ||||||||| ||| ||||| ||||| |||||||||||||
Sbjct: 169 ttgagtaccctgctatcaactgcagaaaacatagtgcagtcttgactgattttggtggtg 228
Query: 188 ttggtgatggaaagacatcaaacacaaaggcatttcaatctgcagtcag 236
|||||||||| || ||||| ||||| ||||| |||||||||||| ||||
Sbjct: 229 ttggtgatggcaaaacatctaacaccaaggcctttcaatctgcaatcag 277
Score = 67.9 bits (34), Expect = 9e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 418 agaggaagagatgcaccagcaggaaggtacaccagcctcatatttggaacaaacctcact 477
|||||||| |||||||| || ||||||| || || ||||| ||||||||||||||||||
Sbjct: 459 agaggaagggatgcacctgctggaaggttcagtagtctcatttttggaacaaacctcact 518
Query: 478 gatgtt 483
||||||
Sbjct: 519 gatgtt 524
>gnl|LJGI|GO012331 similar to UniRef100_A7QNJ7 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 687
Score = 75.8 bits (38), Expect = 4e-13
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 643 tggaatgttcatcctgtttacagcagcaatattattgtgaaaggcatcaccataattgct 702
|||||| | ||||||||||| ||||||| ||||||| |||||||||| || |||||
Sbjct: 357 tggaatatccatcctgtttattgcagcaacgttattgttcaaggcatcacaattcttgct 416
Query: 703 cctgtgacgtctccaaacacagatggcatcaacccagattcctgcacaaa 752
|||||||| || ||||| ||||| ||||||||||| || || ||||||||
Sbjct: 417 cctgtgacatccccaaatacagacggcatcaaccctgactcttgcacaaa 466
Score = 67.9 bits (34), Expect = 9e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 130 gagtacagtgctataaactgcagagcacacagtgcttcattgacagattttggtggtgtt 189
|||||| ||||| | ||||||||||| ||||||| ||| ||||||||||||| || |||
Sbjct: 157 gagtactgtgctgtgaactgcagagcttacagtgcctcagtgacagattttggaggggtt 216
Query: 190 ggtgatggaa 199
||||||||||
Sbjct: 217 ggtgatggaa 226
>gnl|LJGI|TC63331 similar to UniRef100_A7QNJ7 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 1080
Score = 75.8 bits (38), Expect = 4e-13
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 643 tggaatgttcatcctgtttacagcagcaatattattgtgaaaggcatcaccataattgct 702
|||||| | ||||||||||| ||||||| ||||||| |||||||||| || |||||
Sbjct: 138 tggaatatccatcctgtttattgcagcaacgttattgttcaaggcatcacaattcttgct 197
Query: 703 cctgtgacgtctccaaacacagatggcatcaacccagattcctgcacaaa 752
|||||||| || ||||| ||||| ||||||||||| || || ||||||||
Sbjct: 198 cctgtgacatccccaaatacagacggcatcaaccctgactcttgcacaaa 247
>gnl|LJGI|TC65908 similar to UniRef100_A7QNJ7 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 824
Score = 67.9 bits (34), Expect = 9e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 130 gagtacagtgctataaactgcagagcacacagtgcttcattgacagattttggtggtgtt 189
|||||| ||||| | ||||||||||| ||||||| ||| ||||||||||||| || |||
Sbjct: 239 gagtactgtgctgtgaactgcagagcttacagtgcctcagtgacagattttggaggggtt 298
Query: 190 ggtgatggaa 199
||||||||||
Sbjct: 299 ggtgatggaa 308