Miyakogusa Predicted Gene
- Lj1g3v2740260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2740260.1 tr|D7KSP1|D7KSP1_ARALL Glycosyl transferase
family 1 protein OS=Arabidopsis lyrata subsp. lyrata
GN=,58.54,4e-19,seg,NULL; GLYCOSYLTRANSFERASE,NULL,CUFF.29726.1
(442 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS336695 similar to UniRef100_A7NT64 Cluster: Chromosom... 765 0.0
gnl|LJGI|DC598137 similar to UniRef100_A7NT64 Cluster: Chromosom... 718 0.0
gnl|LJGI|TC59287 similar to UniRef100_A7NT64 Cluster: Chromosome... 78 5e-14
gnl|LJGI|BW598616 similar to UniRef100_A7PCK8 Cluster: Chromosom... 62 3e-09
>gnl|LJGI|FS336695 similar to UniRef100_A7NT64 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 592
Score = 765 bits (386), Expect = 0.0
Identities = 386/386 (100%)
Strand = Plus / Plus
Query: 1 atggcgaggcattcgccggcgtggttgacggcaatgccgaagaactggtttcccctgcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atggcgaggcattcgccggcgtggttgacggcaatgccgaagaactggtttcccctgcta 64
Query: 61 gtgctagcggcggtcttgtctctctcaaccgtcaccctcctcttcatccgaaccacttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gtgctagcggcggtcttgtctctctcaaccgtcaccctcctcttcatccgaaccacttcc 124
Query: 121 gattcctgcaacgcttctcagcctcatcccgagcttcatgttccgccgtcgccggaaccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gattcctgcaacgcttctcagcctcatcccgagcttcatgttccgccgtcgccggaaccg 184
Query: 181 tccctggagttcatgaagtcgaagcgggttctgatggtctcgcacgaactctctctctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tccctggagttcatgaagtcgaagcgggttctgatggtctcgcacgaactctctctctcc 244
Query: 241 ggcggtcctctgctgctcatggagttggcgtttctgttgcgcggtgtcggctccgacgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggcggtcctctgctgctcatggagttggcgtttctgttgcgcggtgtcggctccgacgtc 304
Query: 301 gtttggatcaccaaccagaagcctctgcaatctgacgacattgtgtacagtttggagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtttggatcaccaaccagaagcctctgcaatctgacgacattgtgtacagtttggagaat 364
Query: 361 aagatgttggacagaggggtgcaggt 386
||||||||||||||||||||||||||
Sbjct: 365 aagatgttggacagaggggtgcaggt 390
>gnl|LJGI|DC598137 similar to UniRef100_A7NT64 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 559
Score = 718 bits (362), Expect = 0.0
Identities = 380/386 (98%)
Strand = Plus / Plus
Query: 1 atggcgaggcattcgccggcgtggttgacggcaatgccgaagaactggtttcccctgcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atggcgaggcattcgccggcgtggttgacggcaatgccgaagaactggtttcccctgcta 141
Query: 61 gtgctagcggcggtcttgtctctctcaaccgtcaccctcctcttcatccgaaccacttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gtgctagcggcggtcttgtctctctcaaccgtcaccctcctcttcatccgaaccacttcc 201
Query: 121 gattcctgcaacgcttctcagcctcatcccgagcttcatgttccgccgtcgccggaaccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gattcctgcaacgcttctcagcctcatcccgagcttcatgttccgccgtcgccgtttttt 261
Query: 181 tccctggagttcatgaagtcgaagcgggttctgatggtctcgcacgaactctctctctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tccctggagttcatgaagtcgaagcgggttctgatggtctcgcacgaactctctctctcc 321
Query: 241 ggcggtcctctgctgctcatggagttggcgtttctgttgcgcggtgtcggctccgacgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggcggtcctctgctgctcatggagttggcgtttctgttgcgcggtgtcggctccgacgtc 381
Query: 301 gtttggatcaccaaccagaagcctctgcaatctgacgacattgtgtacagtttggagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtttggatcaccaaccagaagcctctgcaatctgacgacattgtgtacagtttggagaat 441
Query: 361 aagatgttggacagaggggtgcaggt 386
||||||||||||||||||||||||||
Sbjct: 442 aagatgttggacagaggggtgcaggt 467
>gnl|LJGI|TC59287 similar to UniRef100_A7NT64 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 842
Score = 77.8 bits (39), Expect = 5e-14
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 190 ttcatgaagtcgaagcgggttctgatggtctcgcacgaactctctctctccggcggtcct 249
||||||||||| |||| ||||| |||||||||||||| || ||||| || || || |||
Sbjct: 331 ttcatgaagtccaagcttgttctcatggtctcgcacgagctttctctttcaggtgggcct 390
Query: 250 ctgctgctcatggagttggcgtttctgttgcgcggtgtcggctccgacgtcgtttggatc 309
|||| || |||||||| |||||||||||| | || || || || || || |||||||||
Sbjct: 391 ttgcttctgatggagttagcgtttctgttgagaggggttggttctgatgttgtttggatc 450
Query: 310 accaaccagaa 320
||||| |||||
Sbjct: 451 accaatcagaa 461
>gnl|LJGI|BW598616 similar to UniRef100_A7PCK8 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 480
Score = 61.9 bits (31), Expect = 3e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 214 atggtctcgcacgaactctctctctccggcggtcctctgctgctcatggagttggcgttt 273
|||||||||||||| || ||||| || || || ||| |||| || |||||||| ||||||
Sbjct: 338 atggtctcgcacgagctttctctttcaggtgggcctttgcttctgatggagttagcgttt 397
Query: 274 ctgttgcgcggtgtcggctccgacgtcgtttggatcaccaaccagaa 320
|||||| | || || || || || || |||||||||||||| |||||
Sbjct: 398 ctgttgagaggggttggttctgatgttgtttggatcaccaatcagaa 444