Miyakogusa Predicted Gene
- Lj1g3v2740230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2740230.1 Non Chatacterized Hit- tr|I1MXZ3|I1MXZ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6966
PE=,78.67,0,GTP_HflX: GTP-binding protein HflX,GTPase HflX; small_GTP:
small GTP-binding protein domain,Small GT,CUFF.29724.1
(1677 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67245 1223 0.0
gnl|LJGI|GO023334 homologue to UniRef100_A7NT61 Cluster: Chromos... 1203 0.0
gnl|LJGI|TC57461 similar to UniRef100_A7NT61 Cluster: Chromosome... 1201 0.0
gnl|LJGI|AV423672 285 4e-76
gnl|LJGI|TC66023 weakly similar to UniRef100_A7PNQ9 Cluster: Chr... 60 5e-08
>gnl|LJGI|TC67245
Length = 924
Score = 1223 bits (617), Expect = 0.0
Identities = 626/629 (99%)
Strand = Plus / Plus
Query: 1049 aattaactggagcagatgttcttgccgaggataaattatttgcaactttagatccaacta 1108
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 aattaactggagcagatgttcttgccgaggatatattatttgcaactttagatccaacta 62
Query: 1109 cgaggagggtacagatgaagaatggaaaggagtttctcctaacagacactgttggtttta 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cgaggagggtacagatgaagaatggaaaggagtttctcctaacagacactgttggtttta 122
Query: 1169 ttcagaagttgcctacaacactagttgctgccttcagagctacgctggaggagatatcag 1228
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 123 ttcagaagttgcctacaacactagctgctgccttcagagctacgctggaggagatatcag 182
Query: 1229 agtcatcacttttggtgcatgtggttgatatcagtcaccccctggctgagcaacagataa 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agtcatcacttttggtgcatgtggttgatatcagtcaccccctggctgagcaacagataa 242
Query: 1289 atgctgtggacaaagttctctcagaactagatgtatcaccaattccaagattgatggtct 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atgctgtggacaaagttctctcagaactagatgtatcaccaattccaagattgatggtct 302
Query: 1349 ggaacaaggttgataaggctagtgatcctcagaaaatcagacttgatgctgaaaaaagag 1408
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggaacaaggttggtaaggctagtgatcctcagaaaatcagacttgatgctgaaaaaagag 362
Query: 1409 aagatgttatatgcatatctgctctaactggcgaagggttacaagaattctgtaatgcag 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aagatgttatatgcatatctgctctaactggcgaagggttacaagaattctgtaatgcag 422
Query: 1469 ttcaagacaaactaaaggactccatggtatgggtagaggctttgttaccatttgaaaatg 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttcaagacaaactaaaggactccatggtatgggtagaggctttgttaccatttgaaaatg 482
Query: 1529 gggaccttctcagcaccatacaccaggttggaatggttgagaaaactgaatatacagagc 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gggaccttctcagcaccatacaccaggttggaatggttgagaaaactgaatatacagagc 542
Query: 1589 aagggacatatatcaaagctcatgtgcccctacgttttgcaagattgcttacacccatga 1648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagggacatatatcaaagctcatgtgcccctacgttttgcaagattgcttacacccatga 602
Query: 1649 ggcaaatgtgtgtatcacgaccttaacat 1677
|||||||||||||||||||||||||||||
Sbjct: 603 ggcaaatgtgtgtatcacgaccttaacat 631
>gnl|LJGI|GO023334 homologue to UniRef100_A7NT61 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 608
Score = 1203 bits (607), Expect = 0.0
Identities = 607/607 (100%)
Strand = Plus / Plus
Query: 799 caacttcctcgtctaacaaaaatgtggactcatcttgagcgtcaagcaggaggaaaggtc 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 caacttcctcgtctaacaaaaatgtggactcatcttgagcgtcaagcaggaggaaaggtc 61
Query: 859 aagggtatgggtgaaaaacaaattgaagtggacaaacgtattttgcgtaaccaaattggt 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagggtatgggtgaaaaacaaattgaagtggacaaacgtattttgcgtaaccaaattggt 121
Query: 919 gttctcaagaaagaactagaatccgtcaggaaacatcgaaagcagtaccgtaacaggcgt 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gttctcaagaaagaactagaatccgtcaggaaacatcgaaagcagtaccgtaacaggcgt 181
Query: 979 ttttcaattcctgtgccagtggtatccttggttggttacacaaatgctggtaagagtacg 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttttcaattcctgtgccagtggtatccttggttggttacacaaatgctggtaagagtacg 241
Query: 1039 cttttgaatcaattaactggagcagatgttcttgccgaggataaattatttgcaacttta 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cttttgaatcaattaactggagcagatgttcttgccgaggataaattatttgcaacttta 301
Query: 1099 gatccaactacgaggagggtacagatgaagaatggaaaggagtttctcctaacagacact 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gatccaactacgaggagggtacagatgaagaatggaaaggagtttctcctaacagacact 361
Query: 1159 gttggttttattcagaagttgcctacaacactagttgctgccttcagagctacgctggag 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gttggttttattcagaagttgcctacaacactagttgctgccttcagagctacgctggag 421
Query: 1219 gagatatcagagtcatcacttttggtgcatgtggttgatatcagtcaccccctggctgag 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gagatatcagagtcatcacttttggtgcatgtggttgatatcagtcaccccctggctgag 481
Query: 1279 caacagataaatgctgtggacaaagttctctcagaactagatgtatcaccaattccaaga 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caacagataaatgctgtggacaaagttctctcagaactagatgtatcaccaattccaaga 541
Query: 1339 ttgatggtctggaacaaggttgataaggctagtgatcctcagaaaatcagacttgatgct 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttgatggtctggaacaaggttgataaggctagtgatcctcagaaaatcagacttgatgct 601
Query: 1399 gaaaaaa 1405
|||||||
Sbjct: 602 gaaaaaa 608
>gnl|LJGI|TC57461 similar to UniRef100_A7NT61 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 842
Score = 1201 bits (606), Expect = 0.0
Identities = 606/606 (100%)
Strand = Plus / Plus
Query: 175 gttctgcaccgcgacctcggagctgaactcgccgcccctgactccaacgacgccgtttca 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gttctgcaccgcgacctcggagctgaactcgccgcccctgactccaacgacgccgtttca 296
Query: 235 aaccccgcaactgagttgctggacgcaccaccgcagcagcaaaatgaagaagaagaacca 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aaccccgcaactgagttgctggacgcaccaccgcagcagcaaaatgaagaagaagaacca 356
Query: 295 gctccgcaaccgcaagtaacgaggttcagaaagaagaaagaagaacagcaagacaacgga 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gctccgcaaccgcaagtaacgaggttcagaaagaagaaagaagaacagcaagacaacgga 416
Query: 355 gacaccttcgataaccgttacaagctccgtaatggaagggaggttttggaagagaaagcg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gacaccttcgataaccgttacaagctccgtaatggaagggaggttttggaagagaaagcg 476
Query: 415 taccttgtcggcgttgagtggaagggtgatgatgttgaggactcttttggtgtgcaagaa 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 taccttgtcggcgttgagtggaagggtgatgatgttgaggactcttttggtgtgcaagaa 536
Query: 475 tctctgagtgaattggcacagttagctgacactgctggattgttggttgttggctctact 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tctctgagtgaattggcacagttagctgacactgctggattgttggttgttggctctact 596
Query: 535 caccagaagcttgcttctccaaaccctaggacgtacattggctccggcaaggtttctgaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 caccagaagcttgcttctccaaaccctaggacgtacattggctccggcaaggtttctgaa 656
Query: 595 attaagagtgcaattcatgggttggatgttgaaactgtaatctttgatgatgagttgtca 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 attaagagtgcaattcatgggttggatgttgaaactgtaatctttgatgatgagttgtca 716
Query: 655 gctgggcaattgcgcaacttggaaaagatttttggtggagatgtgagagtttgtgatcga 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gctgggcaattgcgcaacttggaaaagatttttggtggagatgtgagagtttgtgatcga 776
Query: 715 actgctcttatccttgatatattcaatcagcgagcagccacacatgaagcatctttacag 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 actgctcttatccttgatatattcaatcagcgagcagccacacatgaagcatctttacag 836
Query: 775 gtttca 780
||||||
Sbjct: 837 gtttca 842
Score = 220 bits (111), Expect = 2e-56
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 1 atgagcttatgcccgtacggttccgtcattcaaccaccgccactaactcaacaacaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgagcttatgcccgtacggttccgtcattcaaccaccgccactaactcaacaacaacaa 122
Query: 61 caccgccactatccaatccctcttcttcgccatcctttactatgccgctca 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 caccgccactatccaatccctcttcttcgccatcctttactatgccgctca 173
>gnl|LJGI|AV423672
Length = 256
Score = 285 bits (144), Expect = 4e-76
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 175 gttctgcaccgcgacctcggagctgaactcgccgcccctgactccaacgacgccgtttca 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gttctgcaccgcgacctcggagctgaactcgccgcccctgactccaacgacgccgtttca 172
Query: 235 aaccccgcaactgagttgctggacgcaccaccgcagcagcaaaatgaagaagaagaacca 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aaccccgcaactgagttgctggacgcaccaccgcagcagcaaaatgaagaagaagaacca 232
Query: 295 gctccgcaaccgcaagtaacgagg 318
||||||||||||||||||||||||
Sbjct: 233 gctccgcaaccgcaagtaacgagg 256
Score = 101 bits (51), Expect = 1e-20
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 2 tgagcttatgcccgtacggttccgtcattcaaccaccgccactaactcaac 52
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagcttatgcccgtacggttccgtcattcaaccaccgccactaactcaac 51
>gnl|LJGI|TC66023 weakly similar to UniRef100_A7PNQ9 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 859
Score = 60.0 bits (30), Expect = 5e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 485 aattggcacagttagctgacactgctggattgtt 518
||||||||||||||||||| ||||||||||||||
Sbjct: 104 aattggcacagttagctgagactgctggattgtt 137