Miyakogusa Predicted Gene

Lj1g3v2727080.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2727080.2 tr|G7JDB8|G7JDB8_MEDTR NBS-containing
resistance-like protein OS=Medicago truncatula
GN=MTR_4g023260,43.88,3e-19,seg,NULL,CUFF.29461.2
         (462 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV413126 similar to UniRef100_Q5BK37 Cluster: Rho guani...    94   9e-19
gnl|LJGI|TC66018                                                       58   5e-08

>gnl|LJGI|AV413126 similar to UniRef100_Q5BK37 Cluster: Rho guanine nucleotide
           exchange factor (GEF) 1; n=1; Rattus norvegicus|Rep: Rho
           guanine, partial (1%)
          Length = 370

 Score = 93.7 bits (47), Expect = 9e-19
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                       
Query: 301 gacactatgagcttgaataaaacttacgggatattgaaggcatctattgttctatgtaca 360
           ||||| ||||||||||||| |||||||||||  |||||||| ||||||||||| || || 
Sbjct: 9   gacaccatgagcttgaatagaacttacgggaagttgaaggcttctattgttctgtgcacg 68

                                                                      
Query: 361 agtgaagaactcgtttctgacatatatctgcaggagactgtaatgctccgtggacagca 419
           | ||||||||| |||||||||| |||| ||  ||| ||| || | ||||||||||||||
Sbjct: 69  aatgaagaactggtttctgacaaatatttgttggaaactttattcctccgtggacagca 127



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 432 cttatgggaggttgagggtggaggatgatgg 462
           |||||||||||||||||||||||||||||||
Sbjct: 235 cttatgggaggttgagggtggaggatgatgg 265


>gnl|LJGI|TC66018 
          Length = 645

 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                       
Query: 206 caactgaggaagcctcaacctctggccatggggag-gaagaagaagaatattataatgat 264
           |||| ||||||||||||||||||| ||||||||||  |||| || ||| | ||| |||||
Sbjct: 409 caacagaggaagcctcaacctctgtccatggggagaaaagaggaggaagaatattatgat 468

                            
Query: 265 cctgtgttggatgaatt 281
           ||||| ||||| |||||
Sbjct: 469 cctgtattggaagaatt 485



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 52  tactggggaaaattagagatacaacaggaagatccaacatacaaagcagtgctgagaaag 111
           |||| |||||||||  ||||||| ||   ||| ||||||| |||||||||| ||| ||| 
Sbjct: 259 tactagggaaaattgaagatacaccacagagaaccaacattcaaagcagtgatgaaaaat 318

                                       
Query: 112 acaagccaacttgcaaggagattttgga 139
           ||||||||||| ||  ||||||||||||
Sbjct: 319 acaagccaactagcgtggagattttgga 346