Miyakogusa Predicted Gene

Lj1g3v2727080.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2727080.1 tr|G8A1I9|G8A1I9_MEDTR Nbs-lrr resistance protein
(Fragment) OS=Medicago truncatula GN=MTR_122s0004
,30.82,0.000000000002,CG2471-PA (LP11415P),NULL; LEUCINE-RICH
REPEAT-CONTAINING PROTEIN,NULL; L domain-like,NULL; P-loop
c,CUFF.29461.1
         (2444 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79993 similar to UniRef100_A9ILF6 Cluster: Phosphocar...   248   1e-64
gnl|LJGI|TC77409 weakly similar to UniRef100_A7PG70 Cluster: Chr...    68   3e-10

>gnl|LJGI|TC79993 similar to UniRef100_A9ILF6 Cluster: Phosphocarrier protein HPr;
           n=1; Bartonella tribocorum CIP 105476|Rep:
           Phosphocarrier protein HPr - Bartonella tribocorum
           (strain CIP 105476 / IBS 506), partial (16%)
          Length = 507

 Score =  248 bits (125), Expect = 1e-64
 Identities = 135/137 (98%), Gaps = 1/137 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatcacacgcgttcag-ctggcgtacaagcttcaacaccttaactcacgaattcgtga 59
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atgatcacacgcgttcaggctggcgtacaagcttcaacaccttaactcacgaattcgtga 430

                                                                       
Query: 60  aaccaaggaaaggtgtcagattcatgatggatcttcttcggaacaaggagaatgtggttc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 431 aaccaaggaaaggtgtcagattcatgatggatcttcttcggaacaaggaaaatgtggttc 490

                            
Query: 120 tagttctggaggatacc 136
           |||||||||||||||||
Sbjct: 491 tagttctggaggatacc 507


>gnl|LJGI|TC77409 weakly similar to UniRef100_A7PG70 Cluster: Chromosome chr6
            scaffold_15, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (41%)
          Length = 974

 Score = 67.9 bits (34), Expect = 3e-10
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                        
Query: 973  tgcttgttgtattttggaatatatcctgaagactacgtagttaattcaaagagactgatt 1032
            ||||| ||||| ||||| ||||||||||||||||||| | | ||  |  | |||||||||
Sbjct: 286  tgcttcttgtactttgggatatatcctgaagactacgaaatcaaagctgatagactgatt 345

                                          
Query: 1033 cggcaatgggtagccgaagggtttgtcaaa 1062
             |||| |||||||| |||||||||||||||
Sbjct: 346  aggcagtgggtagctgaagggtttgtcaaa 375