Miyakogusa Predicted Gene
- Lj1g3v2703880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2703880.1 Non Chatacterized Hit- tr|J3N9Q0|J3N9Q0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G2,36.6,3e-19,ZF_RING_2,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type; RING/U-box,NULL;
R,CUFF.29425.1
(573 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66473 similar to UniRef100_A7PZN0 Cluster: Chromosome... 997 0.0
gnl|LJGI|TC71854 similar to UniRef100_A7QNL6 Cluster: Chromosome... 58 6e-08
>gnl|LJGI|TC66473 similar to UniRef100_A7PZN0 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 941
Score = 997 bits (503), Expect = 0.0
Identities = 506/507 (99%)
Strand = Plus / Plus
Query: 1 atgggaggttgctgttgttctgctagaaaacctcacctgcatggaacaccagtgtactac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atgggaggttgctgttgttctgctagaaaacctcacctgcatggaacaccagtgtactac 494
Query: 61 tattgtccaccgactttagaagagcgtcagtatttgacctccaatgatggcgcggctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tattgtccaccgactttagaagagcgtcagtatttgacctccaatgatggcgcggctgct 554
Query: 121 gctggattgctggttaacttgaacctggaatcatccacacctgatacttaccgggcccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gctggattgctggttaacttgaacctggaatcatccacacctgatacttaccgggcccct 614
Query: 181 cccgcacctctgccttatgatatagtcctcggaggtcctgcctcaacagactcggagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cccgcacctctgccttatgatatagtcctcggaggtcctgcctcaacagactcggagtca 674
Query: 241 ggcagagaaacagtcagtgctagtagttttgaaactttgattacatgtgaagatctcgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ggcagagaaacagtcagtgctagtagttttgaaactttgattacatgtgaagatctcgaa 734
Query: 301 gaatctgacggtaaagctcaagttaaatttgcacctatatctccaaggaatgcagaacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gaatctgacggtaaagctcaagttaaatttgcacctatatctccaaggaatgcagaacta 794
Query: 361 tcaaaatcgaacaaatctcatacgctagtggcagaagaagaggacgggtgtccaatttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tcaaaatcgaacaaatctcatacgctagtggcagaagaagaggacgggtgtccaatttgt 854
Query: 421 cttgaagaatatgatggtgagaatcctaaaattctgacaaagtgtgaacaccattttcac 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 855 cttgaagaatatgatggtgagaatcctaaaattctgacaaagtgtgaacaccattttccc 914
Query: 481 ctgtcttgcattcttgagtggatggaa 507
|||||||||||||||||||||||||||
Sbjct: 915 ctgtcttgcattcttgagtggatggaa 941
>gnl|LJGI|TC71854 similar to UniRef100_A7QNL6 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 1283
Score = 58.0 bits (29), Expect = 6e-08
Identities = 88/105 (83%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 412 ccaatttgtcttgaagaatatgatggtgagaatcctaaaat-tctgacaaagtgtgaaca 470
||||||||| | ||||||||||||| |||||||| || | ||| ||||| ||||| ||
Sbjct: 617 ccaatttgtttagaagaatatgatgaagagaatccacaactctct-acaaaatgtgatca 675
Query: 471 ccattttcacctgtcttgcattcttgagtggatggaaagaagtga 515
||||||||||| | |||||||| || |||||||||||||||||
Sbjct: 676 tcattttcaccttgcatgcattctggaatggatggaaagaagtga 720