Miyakogusa Predicted Gene

Lj1g3v2671480.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2671480.1 Non Chatacterized Hit- tr|C5WXX6|C5WXX6_SORBI
Putative uncharacterized protein Sb01g047050
OS=Sorghu,39.63,0.000000000000001,seg,NULL,CUFF.29412.1
         (723 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP034977 similar to UniRef100_A7PZI2 Cluster: Chromosom...   343   9e-94

>gnl|LJGI|BP034977 similar to UniRef100_A7PZI2 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 398

 Score =  343 bits (173), Expect = 9e-94
 Identities = 176/177 (99%)
 Strand = Plus / Minus

                                                                       
Query: 547 aaggaatatatcttggaccaatcagaggcatatgagattaaaatgggggaacaatttttt 606
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaggaatatatcttggacccatcagaggcatatgagattaaaatgggggaacaatttttt 339

                                                                       
Query: 607 agaagacctggagatccacctctcgatgaagttattcagaagtctaaagatgagaaaggc 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agaagacctggagatccacctctcgatgaagttattcagaagtctaaagatgagaaaggc 279

                                                                    
Query: 667 aaaacagagaatgctgaaccagaggaagttgatggaaatttaaaaacagaattgtag 723
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aaaacagagaatgctgaaccagaggaagttgatggaaatttaaaaacagaattgtag 222