Miyakogusa Predicted Gene

Lj1g3v2628710.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2628710.1 tr|G8A207|G8A207_MEDTR Remorin OS=Medicago
truncatula GN=MTR_128s0001 PE=2 SV=1,60,5e-19,FAMILY NOT NAMED,NULL;
coiled-coil,NULL; Remorin_C,Remorin, C-terminal; Remorin_N,Remorin,
N-termina,CUFF.29379.1
         (429 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59730 similar to UniRef100_A7PZA3 Cluster: Chromosome...   716   0.0  
gnl|LJGI|BW596718 similar to UniRef100_A7PZA3 Cluster: Chromosom...   163   1e-39
gnl|LJGI|TC60562 similar to UniRef100_A7PZA3 Cluster: Chromosome...   163   1e-39

>gnl|LJGI|TC59730 similar to UniRef100_A7PZA3 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (69%)
          Length = 863

 Score =  716 bits (361), Expect = 0.0
 Identities = 367/369 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgagctacaaaagaaggcggaatctgacaccactccggctccagttgctgctgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  atggctgagctacaaaagaaggcggaatctgacaccactccggctccagttgctgctgtg 124

                                                                       
Query: 61  ccaccaccatcaaacgacgccgtagccaagaaagctccggaggtggcggcagatgattcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ccaccaccatcaaacgacgccgtagccaagaaagctccggaggtggcggcagatgattcc 184

                                                                       
Query: 121 aaagctcttgttgttgtacctgagaagacaccagttcctgaaaacaaaccaagctcaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaagctcttgttgttgtacctgagaagacaccagttcctgaaaacaaaccaagctcaaaa 244

                                                                       
Query: 181 ggatccctcgatagggatgttgctctggcagaattagagaaagagaaaagactgtcttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggatccctcgatagggatgttgctctggcagaattagagaaagagaaaagactgtcttat 304

                                                                       
Query: 241 gtgaaggcatgggaagaaagtgaaaaaagcaaaacagagaacaaagctcaaaagaatctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtgaaggcatgggaagaaagtgaaaaaagcaaaacagagaacaaagctcaaaagaatctc 364

                                                                       
Query: 301 tctgatgttgttgaatgggaaaacagtaagaaggcagctcttgaagcgcaactgagaaaa 360
           ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 365 tctgatgttgttgcatgggaaaacagtaagaaggcagctcttgaagctcaactgagaaaa 424

                    
Query: 361 attgaggaa 369
           |||||||||
Sbjct: 425 attgaggaa 433


>gnl|LJGI|BW596718 similar to UniRef100_A7PZA3 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (47%)
          Length = 525

 Score =  163 bits (82), Expect = 1e-39
 Identities = 163/190 (85%)
 Strand = Plus / Plus

                                                                       
Query: 180 aggatccctcgatagggatgttgctctggcagaattagagaaagagaaaagactgtctta 239
           ||||||||| ||||| ||| ||||||| |||||| ||||||||||||||||  ||||| |
Sbjct: 335 aggatcccttgatagagatattgctcttgcagaaatagagaaagagaaaaggttgtctaa 394

                                                                       
Query: 240 tgtgaaggcatgggaagaaagtgaaaaaagcaaaacagagaacaaagctcaaaagaatct 299
           |||||||||||||||||||||||| |||  |||| ||||||| ||||| |||||| | ||
Sbjct: 395 tgtgaaggcatgggaagaaagtgagaaatccaaagcagagaataaagcccaaaagcagct 454

                                                                       
Query: 300 ctctgatgttgttgaatgggaaaacagtaagaaggcagctcttgaagcgcaactgagaaa 359
           ||||| ||||| ||  ||||||||||| || |||||||||||||||||  | || |||||
Sbjct: 455 ctctgctgttgctgcttgggaaaacagcaaaaaggcagctcttgaagctaagcttagaaa 514

                     
Query: 360 aattgaggaa 369
           ||| ||||||
Sbjct: 515 aatggaggaa 524


>gnl|LJGI|TC60562 similar to UniRef100_A7PZA3 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (71%)
          Length = 918

 Score =  163 bits (82), Expect = 1e-39
 Identities = 163/190 (85%)
 Strand = Plus / Plus

                                                                       
Query: 180 aggatccctcgatagggatgttgctctggcagaattagagaaagagaaaagactgtctta 239
           ||||||||| ||||| ||| ||||||| |||||| ||||||||||||||||  ||||| |
Sbjct: 325 aggatcccttgatagagatattgctcttgcagaaatagagaaagagaaaaggttgtctaa 384

                                                                       
Query: 240 tgtgaaggcatgggaagaaagtgaaaaaagcaaaacagagaacaaagctcaaaagaatct 299
           |||||||||||||||||||||||| |||  |||| ||||||| ||||| |||||| | ||
Sbjct: 385 tgtgaaggcatgggaagaaagtgagaaatccaaagcagagaataaagcccaaaagcagct 444

                                                                       
Query: 300 ctctgatgttgttgaatgggaaaacagtaagaaggcagctcttgaagcgcaactgagaaa 359
           ||||| ||||| ||  ||||||||||| || |||||||||||||||||  | || |||||
Sbjct: 445 ctctgctgttgctgcttgggaaaacagcaaaaaggcagctcttgaagctaagcttagaaa 504

                     
Query: 360 aattgaggaa 369
           ||| ||||||
Sbjct: 505 aatggaggaa 514