Miyakogusa Predicted Gene
- Lj1g3v2627570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2627570.1 tr|Q6AWV5|Q6AWV5_ARATH At4g00525 OS=Arabidopsis
thaliana GN=At4g00525 PE=2 SV=1,42.4,1e-18, ,CUFF.29345.1
(423 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66151 similar to UniRef100_Q2HVL0 Cluster: T1N6.11, r... 831 0.0
gnl|LJGI|TC65191 similar to UniRef100_A7UUJ0 Cluster: AGAP004646... 101 3e-21
gnl|LJGI|TC82689 weakly similar to UniRef100_Q8RX28 Cluster: His... 72 3e-12
>gnl|LJGI|TC66151 similar to UniRef100_Q2HVL0 Cluster: T1N6.11, related; n=1;
Medicago truncatula|Rep: T1N6.11, related - Medicago
truncatula (Barrel medic), partial (85%)
Length = 747
Score = 831 bits (419), Expect = 0.0
Identities = 422/423 (99%)
Strand = Plus / Plus
Query: 1 atggctcccgaaatggaaagaacccatgaagctgaagaagattcagactcggagttggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atggctcccgaaatggaaagaacccatgaagctgaagaagattcagactcggagttggag 209
Query: 61 aaattggagtctgatttgaagggaatggcgcacaagattctggaataccgagaaactctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aaattggagtctgatttgaagggaatggcgcacaagattctggaataccgagaaactctt 269
Query: 121 ccagatcagctcaagtccactctcgtttcggttctcgatgcccacagaccccttcttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccagatcagctcaagtccactctcgtttcggttctcgatgcccacagaccccttcttcca 329
Query: 181 caactcaacccgggtgcatcagaacaaaacatttctagagaggaaagttcatctgcacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 caactcaacccgggtgcatcagaacaaaacatttctagagaggaaagttcatctgcacca 389
Query: 241 gaagatccagaaactgctaagaaactgaagttactagatgataagatctcaagcaattgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaagatccagaaactgctaagaaactgaagttactagatgataagatctcaagcaattgc 449
Query: 301 tctgctatgccaattgttttgaataggatgaaagactgcattgccaaaattgacaagtta 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tctgctatgccaattgtcttgaataggatgaaagactgcattgccaaaattgacaagtta 509
Query: 361 gattcatacaatgctgcaagcatacatccagccttcaaaaagaagaacactggacaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gattcatacaatgctgcaagcatacatccagccttcaaaaagaagaacactggacaaacc 569
Query: 421 taa 423
|||
Sbjct: 570 taa 572
>gnl|LJGI|TC65191 similar to UniRef100_A7UUJ0 Cluster: AGAP004646-PA; n=1; Anopheles
gambiae str. PEST|Rep: AGAP004646-PA - Anopheles gambiae
str. PEST, partial (3%)
Length = 826
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 40 gattcagactcggagttggagaaattggagtctgatttgaagggaatggcgcacaagatt 99
||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 483 gattccgactcagagttggagaaattggagtctgatttgaatggaatggcgcacaagatt 542
Query: 100 ctg 102
|||
Sbjct: 543 ctg 545
>gnl|LJGI|TC82689 weakly similar to UniRef100_Q8RX28 Cluster: Histone deacetylase 5;
n=1; Arabidopsis thaliana|Rep: Histone deacetylase 5 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 1264
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 59 agaaattggagtctgatttgaagggaatggcgcacaagattctg 102
|||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 276 agaatttggagtctgattttaagggaatggcgcacaagattctg 319