Miyakogusa Predicted Gene

Lj1g3v2627520.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2627520.1 tr|B9I7N6|B9I7N6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_571524 PE=4 SV=1,46.67,4e-17,
,gene.g33423.t1.1
         (819 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68910                                                       80   2e-14
gnl|LJGI|AV776708 similar to UniRef100_O34071 Cluster: ORF40; n=...    56   4e-07

>gnl|LJGI|TC68910 
          Length = 656

 Score = 79.8 bits (40), Expect = 2e-14
 Identities = 82/96 (85%)
 Strand = Plus / Plus

                                                                       
Query: 629 cttcattagggagtttgaaggaagattttgaagatgcaaatgggaataaggaatcaatgc 688
           |||||||| ||||||||||| |||||| ||||| |||||| |||| ||| | ||||| | 
Sbjct: 294 cttcattaaggagtttgaagaaagattctgaaggtgcaaaagggattaaagcatcaagga 353

                                               
Query: 689 tgtctactgacaaagtaaggcgatctgggatccaag 724
           |||||  ||||||||||| || ||||||||||||||
Sbjct: 354 tgtctggtgacaaagtaaagctatctgggatccaag 389



 Score = 65.9 bits (33), Expect = 4e-10
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 375 tgaaaatgatgctgatgtaccttctggttttcttcctaaacatttgcgagctgttccttt 434
           |||||||| ||||||||||||| |||  ||||||||||| | ||||  |  |||||||| 
Sbjct: 187 tgaaaatgttgctgatgtacctcctgagtttcttcctaatcgtttgaaaaatgttccttc 246

                                        
Query: 435 tggaaattctgttcaagttggtttcaaag 463
           ||| ||||||||||||| |||||| ||||
Sbjct: 247 tgggaattctgttcaagatggtttgaaag 275



 Score = 61.9 bits (31), Expect = 6e-09
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                       
Query: 219 gagaagtgcaaggccatcaaaacgtggacctcatgtagttaaagcaaacagaagtggtaa 278
           |||||||||||||||||||||  |||| ||||||||||   ||| |||||  |||||| |
Sbjct: 31  gagaagtgcaaggccatcaaattgtgggcctcatgtaggagaagtaaacaatagtggtga 90

                              
Query: 279 tgatgctgatgctccacct 297
           |||| |||||| |||||||
Sbjct: 91  tgatcctgatgttccacct 109


>gnl|LJGI|AV776708 similar to UniRef100_O34071 Cluster: ORF40; n=1; Streptococcus
           phage O1205|Rep: ORF40 - Streptococcus phage O1205,
           partial (1%)
          Length = 603

 Score = 56.0 bits (28), Expect = 4e-07
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 340 aaatcttgtgatgatggtttgaaaactgtgaaggttgaaaatgatgctgatgtaccttct 399
           ||||||| |||||||||||  | || |||||||||||| |||||||| ||||| ||  ||
Sbjct: 509 aaatcttttgatgatggttcaagaagtgtgaaggttgagaatgatgcagatgttccacct 450

                           
Query: 400 ggttttcttcctaaac 415
           || |||||||| ||||
Sbjct: 449 gggtttcttcccaaac 434