Miyakogusa Predicted Gene

Lj1g3v2627360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2627360.1 tr|A2Q3N2|A2Q3N2_MEDTR Zinc finger, CCHC-type
OS=Medicago truncatula GN=MTR_7g076420 PE=4
SV=1,33.09,0.0000002,ZF_CCHC,Zinc finger, CCHC-type,CUFF.29334.1
         (378 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77917                                                      733   0.0  
gnl|LJGI|GO024521                                                      50   1e-05

>gnl|LJGI|TC77917 
          Length = 525

 Score =  733 bits (370), Expect = 0.0
 Identities = 376/378 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagcctttgaacatcatcaacctgagttgaaattgccacccgaatggttccatgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  atggaagcctttgaacatcatcaacctgagttgaaattgccacccgaatggttccatgat 115

                                                                       
Query: 61  cctttagccaagtgttactcaaacttggacacattggacactttctgctattccgaggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 cctttagccaagtgttactcaaacttggacacattggacactttctgctattccgaggag 175

                                                                       
Query: 121 ttgttttgctttgtagattctcctcctccaaatcctctactgttgaaaaatgttgatgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ttgttttgctttgtagattctcctcctccaaatcctctactgttgaaaaatgttgatgac 235

                                                                       
Query: 181 actaatacggtaaaggtggataattcacctgaaactgaggaaccatctgatgctgtagcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 actaatacggtaaaggtggataattcacctgaaactgaggaaccatctgatgctgtagcc 295

                                                                       
Query: 241 aaagaaactccagcattggaaactgctcccgctctcgaaaaggctgaagttcctgtttct 300
           |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 296 aaagaaactccagcattggaaactgctcccgctccccaaaaggctgaagttcctgtttct 355

                                                                       
Query: 301 aaagaaaggaggaaaactcgatgcggattctgtggtgaagaaggacataaccgacgatca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aaagaaaggaggaaaactcgatgcggattctgtggtgaagaaggacataaccgacgatca 415

                             
Query: 361 tgttcccttgaaacctag 378
           ||||||||||||||||||
Sbjct: 416 tgttcccttgaaacctag 433


>gnl|LJGI|GO024521 
          Length = 539

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 332 gtggtgaagaaggacataaccgacgatcatgtt 364
           |||||||||||||||||||||||| ||| ||||
Sbjct: 348 gtggtgaagaaggacataaccgacaatcttgtt 380