Miyakogusa Predicted Gene

Lj1g3v2626240.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2626240.1 Non Chatacterized Hit- tr|F2UEE3|F2UEE3_SALS5
Putative uncharacterized protein OS=Salpingoeca sp.
(s,33.04,0.088,coiled-coil,NULL,CUFF.29323.1
         (372 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69685 similar to UniRef100_A7P7W4 Cluster: Chromosome...   737   0.0  

>gnl|LJGI|TC69685 similar to UniRef100_A7P7W4 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 770

 Score =  737 bits (372), Expect = 0.0
 Identities = 372/372 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgcttcaatgtgcgaagaaggaggcttactttgttcaccggcaccgcaaagatccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atggcgcttcaatgtgcgaagaaggaggcttactttgttcaccggcaccgcaaagatccc 286

                                                                       
Query: 61  attggtgataatgatgatattcatagtgaaaataaacgcttgaaggggaagataatggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 attggtgataatgatgatattcatagtgaaaataaacgcttgaaggggaagataatggat 346

                                                                       
Query: 121 attgaagataggctgttgacacttgaacaacaggttgccacattgaagcggttgcataag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 attgaagataggctgttgacacttgaacaacaggttgccacattgaagcggttgcataag 406

                                                                       
Query: 181 gtagttgatgacctagctgctaagaaggagcctgactttggtttctatctctgcaaagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gtagttgatgacctagctgctaagaaggagcctgactttggtttctatctctgcaaagat 466

                                                                       
Query: 241 cccgttgatgatattcggagtgaaaataagcgcatgatggagaagatggtggaacttagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cccgttgatgatattcggagtgaaaataagcgcatgatggagaagatggtggaacttagt 526

                                                                       
Query: 301 gatagactgttggtactcgagcatgaatttcccctattggagaagctgtggtgtaaggaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gatagactgttggtactcgagcatgaatttcccctattggagaagctgtggtgtaaggaa 586

                       
Query: 361 gttgtttagtct 372
           ||||||||||||
Sbjct: 587 gttgtttagtct 598