Miyakogusa Predicted Gene
- Lj1g3v2625880.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2625880.2 Non Chatacterized Hit- tr|I1N3L3|I1N3L3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53617 PE,91.87,0,EXS
FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN,NULL; XENOTROPIC AND
POLYTROPIC RETROVIRUS RECEPT,CUFF.29318.2
(747 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO029947 similar to UniRef100_A2Q1H6 Cluster: EXS, C-te... 434 e-121
gnl|LJGI|AV406798 similar to UniRef100_A7PXJ6 Cluster: Chromosom... 147 1e-34
gnl|LJGI|TC75287 similar to UniRef100_A7PXJ6 Cluster: Chromosome... 103 2e-21
>gnl|LJGI|GO029947 similar to UniRef100_A2Q1H6 Cluster: EXS, C-terminal; n=1; Medicago
truncatula|Rep: EXS, C-terminal - Medicago truncatula
(Barrel medic), partial (32%)
Length = 765
Score = 434 bits (219), Expect = e-121
Identities = 238/247 (96%)
Strand = Plus / Minus
Query: 501 cttttgggcaatcggaagcaactttattctgcgctgttcatggacgtacaaattatctgc 560
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 765 cttttgggcaatcggaagcagctttattctgcgctgttcatggacgtacaaattatctgc 706
Query: 561 gcatctccgtcataactacctgacagtgttcgcgatcactctaatggagatgctacggcg 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gcatctccgtcataactacctgacagtgttcgcgatcactctaatggagatgctacggcg 646
Query: 621 cttccagtgggnnnnnnnnagagttgaaaatgagtggaacaagattacccggtccggtgt 680
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cttccagtgggttttttttagagttgaaaatgagtggaacaagattacccggtccggtgt 586
Query: 681 tcaactcacagaaattccaagagaggaggagaaattgctagggtccaacaatcatgatgt 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tcaactcacagaaattccaagagaggaggagaaattgctagggtccaacaatcatgatgt 526
Query: 741 atagaga 747
|||||||
Sbjct: 525 atagaga 519
>gnl|LJGI|AV406798 similar to UniRef100_A7PXJ6 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 424
Score = 147 bits (74), Expect = 1e-34
Identities = 288/359 (80%), Gaps = 2/359 (0%)
Strand = Plus / Plus
Query: 14 cattccctgacttttttgtggctgatattttaacctccatggcaaaggttttttcagatt 73
||||| |||| ||||| ||||||||||||| || ||||||| |||||| ||||| ||||
Sbjct: 30 cattctctgattttttcttggctgatattttgacttccatggtaaaggtcttttctgatt 89
Query: 74 tggagcgttccgtttgtagaatggtaaacagacaggttgccacaattgcttggcttgaag 133
|||||||||| || ||||||||||| || ||||||||||||||||||||||| | ||||
Sbjct: 90 tggagcgttcagtatgtagaatggtccaccgacaggttgccacaattgcttggttggaag 149
Query: 134 ctgactctgtttgtggtagtcactcagttgcgataccaatggttcttgttcttccttata 193
|||| |||||||| || |||||||| ||||| || || ||||||||||| | || ||
Sbjct: 150 ctgattctgtttgcggcagtcactctgttgcaatccctttggttcttgttttgccctacc 209
Query: 194 tatggcgt-ttattgcaatgtcttcgtcaatacaaagacaccagagnnnnnnnttgtctc 252
| | || ||| | |||||||| || || || ||||| || | | ||||||
Sbjct: 210 ttttccgccttaat-caatgtctccgacagtataaagatactggcgagaaaagttgtctt 268
Query: 253 ttcaatgctttaaaatattcgactgcagtccccgtaatttttctttcagcccttaaatat 312
| ||||||||||||||||| || ||||| || || ||||||||||| ||||||||||||
Sbjct: 269 ctgaatgctttaaaatattcaacagcagtgccagtgatttttctttctgcccttaaatat 328
Query: 313 catgtcttccctgagaaatggacaacgctttatcggccactgtggcttctttcaagtgt 371
|| ||||||||||| || ||||||| | ||| |||| || |||||||| ||||||||
Sbjct: 329 cacgtcttccctgataagtggacaaacttctataggcctctctggcttctgtcaagtgt 387
>gnl|LJGI|TC75287 similar to UniRef100_A7PXJ6 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1210
Score = 103 bits (52), Expect = 2e-21
Identities = 245/309 (79%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 64 ttttcagatttggagcgttccgtttgtagaatggtaaacagacaggttgccacaattgct 123
||||| |||||||||||||| || ||||||||||| || ||| ||||||||||||||||
Sbjct: 163 ttttctgatttggagcgttcagtatgtagaatggtccaccgacgggttgccacaattgct 222
Query: 124 tggcttgaagctgactctgtttgtggtagtcactcagttgcgataccaatggttcttgtt 183
||| | |||||||| |||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 223 tggttggaagctgattctgtttgcggcagtcactctgttgcaatccctttggttcttgtt 282
Query: 184 cttccttatatatggcgt-ttattgcaatgtcttcgtcaatacaaagacaccagagnnnn 242
| || || | | || ||| | |||||||| || || || ||||| || | |
Sbjct: 283 ttgccctaccttttccgccttaat-caatgtctccgacagtataaagatactggcgagaa 341
Query: 243 nnnttgtctcttcaatgctttaaaatattcgactgcagtccccgtaatttttctttcagc 302
|||||| | ||||||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 342 aagttgtcttctgaatgctttaaaatattcaacagcagtgccagtgatttttctttctgc 401
Query: 303 ccttaaatatcatgtcttccctgagaaatggacaacgctttatcggccactgtggcttct 362
|||||||||||| ||||||||||| || ||||||| | ||| |||| || ||||||||
Sbjct: 402 ccttaaatatcacgtcttccctgataagtggacaaacttctataggcctctctggcttct 461
Query: 363 ttcaagtgt 371
||||||||
Sbjct: 462 gtcaagtgt 470