Miyakogusa Predicted Gene
- Lj1g3v2612700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2612700.1 Non Chatacterized Hit- tr|Q8VWW4|Q8VWW4_ORYSA
Putative uncharacterized protein (Fragment) OS=Oryza
s,65.67,1e-17,seg,NULL; F-box domain,F-box domain, cyclin-like; no
description,NULL,CUFF.29303.1
(1104 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68551 similar to UniRef100_A2Q5C7 Cluster: Cyclin-lik... 2173 0.0
gnl|LJGI|TC73922 weakly similar to UniRef100_A2Q5C7 Cluster: Cyc... 936 0.0
gnl|LJGI|TC63667 similar to UniRef100_A2Q5C7 Cluster: Cyclin-lik... 270 2e-71
gnl|LJGI|FS353632 similar to UniRef100_A2Q5C7 Cluster: Cyclin-li... 198 5e-50
>gnl|LJGI|TC68551 similar to UniRef100_A2Q5C7 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (79%)
Length = 1531
Score = 2173 bits (1096), Expect = 0.0
Identities = 1102/1104 (99%)
Strand = Plus / Plus
Query: 1 atgtcgatgatggaatgccgtaaagattttctcagttttcttgattctgacatgtctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atgtcgatgatggaatgccgtaaagattttctcagttttcttgattctgacatgtctctc 177
Query: 61 aagatactcatgtgtcttgatgatccagtagaccttgttcgtgtcagctgtgtctcgcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 aagatactcatgtgtcttgatgatccagtagaccttgttcgtgtcagctgtgtctcgcga 237
Query: 121 tcttggagacactacgtgattgtaaatagcctttgtaagcagctgtgcttgagaatattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tcttggagacactacgtgattgtaaatagcctttgtaagcagctgtgcttgagaatattt 297
Query: 181 cctcaattatctagagttacccgtgtcgttgaaacgaatcaacatggattggaggaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cctcaattatctagagttacccgtgtcgttgaaacgaatcaacatggattggaggaaacc 357
Query: 241 ccggaagttggatccagctcttctatggaatggctagctctgcagagagatcatagagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ccggaagttggatccagctcttctatggaatggctagctctgcagagagatcatagagtc 417
Query: 301 tatgcttatttagctagatctttcaagtcatctgtttctatgaattgcattgccaagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tatgcttatttagctagatctttcaagtcatctgtttctatgaattgcattgccaagaca 477
Query: 361 attgttgcttctagcactgataattttcctcaggagagcattgataatactctggagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 attgttgcttctagcactgataattttcctcaggagagcattgataatactctggagcca 537
Query: 421 agtgaccacattgctggtagatattcctactggtcaagtaatggacacagtaatcccaac 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 538 agtgaccacattgctggtagatattcctactggtcaagtaatggacaaagtaatcccaac 597
Query: 481 gtgcctgagacattaacatatgagttagcctctcaaatttgtgttgttacagagatcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gtgcctgagacattaacatatgagttagcctctcaaatttgtgttgttacagagatcaat 657
Query: 541 atccagccgttccaagcttactttcagatggggggacctatctattcagcaaaatctgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atccagccgttccaagcttactttcagatggggggacctatctattcagcaaaatctgtt 717
Query: 601 cggtttaaaatgggtcatattaatgcctctttagatgcttcagctgatgaaaagattgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 cggtttaaaatgggtcatattaatgcctctttagatgcttcagctgatgaaaagattgta 777
Query: 661 tggacctacacttcaccggagtttccaatgactcaggaaaacgagctgcagaatttcaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 778 tggacctacacttcaccggagtttccaatgactcaggaaaacgagctgcagaattccaag 837
Query: 721 cttccagaacctgtactttgtattggcggtatcttacaggttgagcttttgggaagggta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 cttccagaacctgtactttgtattggcggtatcttacaggttgagcttttgggaagggta 897
Query: 781 cagagacaagaaatggatggcttgctatacatttgtatttctcatgttcaagctgtgggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 cagagacaagaaatggatggcttgctatacatttgtatttctcatgttcaagctgtgggg 957
Query: 841 agcttgttgtcacctgcatttagtgttgacattctggagccctctggaatgtttgtgttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 agcttgttgtcacctgcatttagtgttgacattctggagccctctggaatgtttgtgttg 1017
Query: 901 aagtgtgaccggaactatcagcccccagcgacctctgaagaagaatctggtgcaaattcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 aagtgtgaccggaactatcagcccccagcgacctctgaagaagaatctggtgcaaattcc 1077
Query: 961 actgattatatgcagaggggactgagagatttccaacagattgtgactatattgcgtgga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 actgattatatgcagaggggactgagagatttccaacagattgtgactatattgcgtgga 1137
Query: 1021 catgtaataggagttgtggaagatgattgggatgaggaagaatatgaagctgatgatttt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1138 catgtaataggagttgtggaagatgattgggatgaggaagaatatgaagctgatgatttt 1197
Query: 1081 gaagaagaatatgctctctgacca 1104
||||||||||||||||||||||||
Sbjct: 1198 gaagaagaatatgctctctgacca 1221
>gnl|LJGI|TC73922 weakly similar to UniRef100_A2Q5C7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (41%)
Length = 668
Score = 936 bits (472), Expect = 0.0
Identities = 475/476 (99%)
Strand = Plus / Plus
Query: 1 atgtcgatgatggaatgccgtaaagattttctcagttttcttgattctgacatgtctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atgtcgatgatggaatgccgtaaagattttctcagttttcttgattctgacatgtctctc 252
Query: 61 aagatactcatgtgtcttgatgatccagtagaccttgttcgtgtcagctgtgtctcgcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aagatactcatgtgtcttgatgatccagtagaccttgttcgtgtcagctgtgtctcgcga 312
Query: 121 tcttggagacactacgtgattgtaaatagcctttgtaagcagctgtgcttgagaatattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcttggagacactacgtgattgtaaatagcctttgtaagcagctgtgcttgagaatattt 372
Query: 181 cctcaattatctagagttacccgtgtcgttgaaacgaatcaacatggattggaggaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cctcaattatctagagttacccgtgtcgttgaaacgaatcaacatggattggaggaaacc 432
Query: 241 ccggaagttggatccagctcttctatggaatggctagctctgcagagagatcatagagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ccggaagttggatccagctcttctatggaatggctagctctgcagagagatcatagagtc 492
Query: 301 tatgcttatttagctagatctttcaagtcatctgtttctatgaattgcattgccaagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tatgcttatttagctagatctttcaagtcatctgtttctatgaattgcattgccaagaca 552
Query: 361 attgttgcttctagcactgataattttcctcaggagagcattgataatactctggagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 attgttgcttctagcactgataattttcctcaggagagcattgataatactctggagcca 612
Query: 421 agtgaccacattgctggtagatattcctactggtcaagtaatggacacagtaatcc 476
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 613 agtgaccacattgctggtagatattcctactggtcaagtaatggacaaagtaatcc 668
>gnl|LJGI|TC63667 similar to UniRef100_A2Q5C7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (12%)
Length = 1116
Score = 270 bits (136), Expect = 2e-71
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 1 atgtcgatgatggaatgccgtaaagattttctcagttttcttgattctgacatgtctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atgtcgatgatggaatgccgtaaagattttctcagttttcttgattctgacatgtctctc 251
Query: 61 aagatactcatgtgtcttgatgatccagtagaccttgttcgtgtcagctgtgtctcgcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aagatactcatgtgtcttgatgatccagtagaccttgttcgtgtcagctgtgtctcgcga 311
Query: 121 tcttggagacactacg 136
||||||||||||||||
Sbjct: 312 tcttggagacactacg 327
>gnl|LJGI|FS353632 similar to UniRef100_A2Q5C7 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (7%)
Length = 715
Score = 198 bits (100), Expect = 5e-50
Identities = 100/100 (100%)
Strand = Plus / Minus
Query: 136 gtgattgtaaatagcctttgtaagcagctgtgcttgagaatatttcctcaattatctaga 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gtgattgtaaatagcctttgtaagcagctgtgcttgagaatatttcctcaattatctaga 41
Query: 196 gttacccgtgtcgttgaaacgaatcaacatggattggagg 235
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 gttacccgtgtcgttgaaacgaatcaacatggattggagg 1