Miyakogusa Predicted Gene
- Lj1g3v2610300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2610300.1 Non Chatacterized Hit- tr|I1N3I6|I1N3I6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13801 PE,73.61,0,no
description,Zinc finger, RING/FYVE/PHD-type; ZF_RING_2,Zinc finger,
RING-type; zf-RING_2,Zinc fin,CUFF.29260.1
(1074 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60825 similar to UniRef100_A7PXY8 Cluster: Chromosome... 965 0.0
gnl|LJGI|TC71344 weakly similar to UniRef100_A7PXY8 Cluster: Chr... 963 0.0
gnl|LJGI|BP080626 similar to UniRef100_A7PXY8 Cluster: Chromosom... 583 e-166
gnl|LJGI|TC81930 weakly similar to UniRef100_Q93Z92 Cluster: E3 ... 525 e-148
gnl|LJGI|TC76694 similar to UniRef100_A7QKH8 Cluster: Chromosome... 66 5e-10
gnl|LJGI|TC69207 similar to UniRef100_Q9LN71 Cluster: E3 ubiquit... 56 5e-07
gnl|LJGI|TC65678 similar to UniRef100_A7P3V3 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC60825 similar to UniRef100_A7PXY8 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 833
Score = 965 bits (487), Expect = 0.0
Identities = 487/487 (100%)
Strand = Plus / Plus
Query: 588 ggattcacctcagctttactggctctgtattacgtttcttgctttcgatgttgtgattgt 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggattcacctcagctttactggctctgtattacgtttcttgctttcgatgttgtgattgt 60
Query: 648 actgatctgtgctgctgttgcatgttttattggcattgccgtctgctgttgtctaccgtg 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgatctgtgctgctgttgcatgttttattggcattgccgtctgctgttgtctaccgtg 120
Query: 708 catacttgctcttttgtatgcgatggcggatcaagaaggggcaaccgaggaagaaatcga 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catacttgctcttttgtatgcgatggcggatcaagaaggggcaaccgaggaagaaatcga 180
Query: 768 ccagttgccaaaatataagttcagaatgataaaggaatttaagaaagaaggcgatatcca 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccagttgccaaaatataagttcagaatgataaaggaatttaagaaagaaggcgatatcca 240
Query: 828 agaatcttccagtggagtaatgacaaaatgtgacagtgatacagctgctgagcatgttat 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaatcttccagtggagtaatgacaaaatgtgacagtgatacagctgctgagcatgttat 300
Query: 888 tgccttagaagatgcagaatgctgtatctgcctttctgcctatgatgacggtgttgaact 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgccttagaagatgcagaatgctgtatctgcctttctgcctatgatgacggtgttgaact 360
Query: 948 cagacaacttccttgcaaccaccattttcatcgcacatgcattgacaaatggctgctaat 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagacaacttccttgcaaccaccattttcatcgcacatgcattgacaaatggctgctaat 420
Query: 1008 caatgctacatgccctctctgcaaattcaacattttggagactggaaacctccatcaaga 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caatgctacatgccctctctgcaaattcaacattttggagactggaaacctccatcaaga 480
Query: 1068 agtttga 1074
|||||||
Sbjct: 481 agtttga 487
>gnl|LJGI|TC71344 weakly similar to UniRef100_A7PXY8 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 726
Score = 963 bits (486), Expect = 0.0
Identities = 533/556 (95%)
Strand = Plus / Plus
Query: 66 tagcgggcggcggatgatgctgcgggagccgtcggtccgtgtccgggaggcggcggctga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tagcgggcggcggatgatgctgcgggagccgtcggtccgtgtccgggaggcggcggctga 230
Query: 126 ggaggtggaggagcggcagagcgagtgggcgtactcgaagccggtggtggcgctggacct 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ggaggtggaggagcggcagagcgagtgggcgtactcgaagccggtggtggcgctggacct 290
Query: 186 ggcgtggaacttggtgttccttgctattggggccaccgtgctgggtgtgagcaccaagga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggcgtggaacttggtgttccttgctattggggccaccgtgctgggtgtgagcaccaagga 350
Query: 246 ggagccatgcgtgcccctcagggtgtggattgttgggtacttgttgcagggtctgcttca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggagccatgcgtgcccctcagggtgtggattgttgggtacttgttgcagggtctgcttca 410
Query: 306 ctctgtgtgtgttgtctttgaattcagaagaaaaagaagaagggaattaggggnnnnnnn 365
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ctctgtgtgtgttgtctttgaattcagaagaaaaagaagaagggaattaggggcttcttc 470
Query: 366 nnnnnnnnnnnnnnnatctggtttggagcatgatagaagatgggagagtgctgctattca 425
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ttctttttcttcttcatctggtttggagcatgatagaagatgggagagtgctgctattca 530
Query: 426 atggagttatagttctgagagtgatggttcttcagagcagcttctccagactgaggaaaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atggagttatagttctgagagtgatggttcttcagagcagcttctccagactgaggaaaa 590
Query: 486 cagcatcacgaaacacattgagtctgcaaataccatgctttcattcatatggtggattct 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cagcatcacgaaacacattgagtctgcaaataccatgctttcattcatatggtggattct 650
Query: 546 tgggttctactgggttactgctggtggccagagtttgacaagggattcacctcagcttta 605
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 651 tgggttctactgggttactgctggtggccagagtttgacaagggattcacctcatcttta 710
Query: 606 ctggctctgtattacg 621
||||||||||||||||
Sbjct: 711 ctggctctgtattacg 726
Score = 137 bits (69), Expect = 2e-31
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 atgcacacttcaaacccaccttcttcctccgccgccaccgtcgactccgagccgttcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atgcacacttcaaacccaccttcttcctccgccgccaccgtcgactccgagccgttcctc 96
Query: 61 ctccgtagc 69
|||||||||
Sbjct: 97 ctccgtagc 105
>gnl|LJGI|BP080626 similar to UniRef100_A7PXY8 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 360
Score = 583 bits (294), Expect = e-166
Identities = 297/298 (99%)
Strand = Plus / Minus
Query: 607 tggctctgtattacgtttcttgctttcgatgttgtgattgtactgatctgtgctgctgtt 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggctctgtattacgtttcttgctttcgatgttgtgattgtactgatctgtgctgctgtt 301
Query: 667 gcatgttttattggcattgccgtctgctgttgtctaccgtgcatacttgctcttttgtat 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gcatgttttattggcattgccgtctgctgttgtctaccgtgcatacttgctcttttgtat 241
Query: 727 gcgatggcggatcaagaaggggcaaccgaggaagaaatcgaccagttgccaaaatataag 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gcgatggcggatcaagaaggggcaaccgaggaagaaatcgaccagttgccaaaatataag 181
Query: 787 ttcagaatgataaaggaatttaagaaagaaggcgatatccaagaatcttccagtggagta 846
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 180 ttcagaatgataaaggaatttaagaaagaaggcgatatcccagaatcttccagtggagta 121
Query: 847 atgacaaaatgtgacagtgatacagctgctgagcatgttattgccttagaagatgcag 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgacaaaatgtgacagtgatacagctgctgagcatgttattgccttagaagatgcag 63
>gnl|LJGI|TC81930 weakly similar to UniRef100_Q93Z92 Cluster: E3 ubiquitin-protein
ligase At4g11680; n=1; Arabidopsis thaliana|Rep: E3
ubiquitin-protein ligase At4g11680 - Arabidopsis
thaliana (Mouse-ear cress), partial (21%)
Length = 487
Score = 525 bits (265), Expect = e-148
Identities = 265/265 (100%)
Strand = Plus / Plus
Query: 66 tagcgggcggcggatgatgctgcgggagccgtcggtccgtgtccgggaggcggcggctga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tagcgggcggcggatgatgctgcgggagccgtcggtccgtgtccgggaggcggcggctga 282
Query: 126 ggaggtggaggagcggcagagcgagtgggcgtactcgaagccggtggtggcgctggacct 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ggaggtggaggagcggcagagcgagtgggcgtactcgaagccggtggtggcgctggacct 342
Query: 186 ggcgtggaacttggtgttccttgctattggggccaccgtgctgggtgtgagcaccaagga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggcgtggaacttggtgttccttgctattggggccaccgtgctgggtgtgagcaccaagga 402
Query: 246 ggagccatgcgtgcccctcagggtgtggattgttgggtacttgttgcagggtctgcttca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ggagccatgcgtgcccctcagggtgtggattgttgggtacttgttgcagggtctgcttca 462
Query: 306 ctctgtgtgtgttgtctttgaattc 330
|||||||||||||||||||||||||
Sbjct: 463 ctctgtgtgtgttgtctttgaattc 487
Score = 137 bits (69), Expect = 2e-31
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 atgcacacttcaaacccaccttcttcctccgccgccaccgtcgactccgagccgttcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atgcacacttcaaacccaccttcttcctccgccgccaccgtcgactccgagccgttcctc 148
Query: 61 ctccgtagc 69
|||||||||
Sbjct: 149 ctccgtagc 157
>gnl|LJGI|TC76694 similar to UniRef100_A7QKH8 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 813
Score = 65.9 bits (33), Expect = 5e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 898 gatgcagaatgctgtatctgcctttctgcctatgatgacggtgttgaactcagacaactt 957
||||| ||||| ||||||||||||||| | |||||||| || |||||||| ||| |||||
Sbjct: 375 gatgcggaatgttgtatctgcctttcttcttatgatgatggggttgaactaagagaactt 434
Query: 958 ccttg 962
|||||
Sbjct: 435 ccttg 439
>gnl|LJGI|TC69207 similar to UniRef100_Q9LN71 Cluster: E3 ubiquitin-protein ligase
At1g12760; n=2; Arabidopsis thaliana|Rep: E3
ubiquitin-protein ligase At1g12760 - Arabidopsis
thaliana (Mouse-ear cress), partial (34%)
Length = 777
Score = 56.0 bits (28), Expect = 5e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 131 tggaggagcggcagagcgagtgggcgtactcgaagccggt 170
|||||||| |||||||||| |||||||| |||||||||||
Sbjct: 372 tggaggagaggcagagcgattgggcgtattcgaagccggt 411
>gnl|LJGI|TC65678 similar to UniRef100_A7P3V3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 1663
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 157 tactcgaagccggtggtggcgctggacctggcgtggaac 195
|||||||||||||||||||| || ||| |||||||||||
Sbjct: 264 tactcgaagccggtggtggcccttgacatggcgtggaac 302