Miyakogusa Predicted Gene
- Lj1g3v2582410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2582410.1 Non Chatacterized Hit- tr|I3SDF2|I3SDF2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,50,0.0002,seg,NULL,CUFF.29285.1
(420 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP055890 similar to UniRef100_Q95HN6 Cluster: MHC class... 107 5e-23
gnl|LJGI|TC76490 70 1e-11
gnl|LJGI|TC78456 similar to UniRef100_A7QE22 Cluster: Chromosome... 60 1e-08
gnl|LJGI|BP041637 54 7e-07
gnl|LJGI|DC593665 homologue to UniRef100_A9B8F4 Cluster: Undecap... 52 3e-06
>gnl|LJGI|BP055890 similar to UniRef100_Q95HN6 Cluster: MHC class I chain-related
protein A; n=4; Homo sapiens|Rep: MHC class I
chain-related protein A - Homo sapiens (Human), partial
(5%)
Length = 542
Score = 107 bits (54), Expect = 5e-23
Identities = 195/240 (81%), Gaps = 9/240 (3%)
Strand = Plus / Minus
Query: 183 ccacagtccaaaatcacttttctacgccaacttatactctccttggaatgattactacac 242
||||| || ||||||||| |||| ||||||||||||||||||| ||| ||| | || |
Sbjct: 542 ccacattcaaaaatcactcttcttcgccaacttatactctcctcggagtgactcct---c 486
Query: 243 tccttttactgctcatcgtgatactcctccttcaattcttaatgtttcacttgaatcttc 302
|||| ||||||| ||||| ||||| | ||||||||||||||| |||||| ||||||||
Sbjct: 485 tcctcctactgcttatcgttatactgccccttcaattcttaatagttcactggaatcttc 426
Query: 303 acgctcttctcttccttcccatggttctattccttctcctcattcacattcaccaaattc 362
|| |||| ||| ||| | ||||| |||| || ||| |||||||| |||||||| |||
Sbjct: 425 actctctcctcatccatgccatgtttctcttactt---ctcattcaatttcaccaatttc 369
Query: 363 t---tctttttcttgtttcattcatctaatccatctcctcttccactttctaaatctcta 419
| || |||||| ||||| || |||||| |||||||| ||||||||||||| ||||||
Sbjct: 368 tccgtcagtttcttctttcactcttctaatacatctcctattccactttctaattctcta 309
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 271 ccttcaattcttaatgtttcacttgaatcttcacgctcttctcttccttcccatggttct 330
|||||| ||||||||| |||||||||||| ||| | || ||||||||||||||| ||||
Sbjct: 164 ccttcatttcttaatggttcacttgaatcaccactcactcctcttccttcccatgtttct 105
>gnl|LJGI|TC76490
Length = 979
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 249 tactgctcatcgtgatactcctccttcaattcttaatgtttcacttgaatcttcacgctc 308
||||| ||||| | |||||||||||||| ||||| ||| |||||||||||| |||| ||
Sbjct: 645 tactgttcatccttatactcctccttcatttcttcatggttcacttgaatcatcactgtc 704
Query: 309 ttctcttccttcccatggttctattcc 335
| |||||||||| |||| |||| ||||
Sbjct: 705 tcctcttccttctcatgtttctcttcc 731
Score = 54.0 bits (27), Expect = 7e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 281 ttaatgtttcacttgaatcttcacgctcttctcttccttcccatggttctattccttctc 340
|||| |||||||||||||| |||| |||| || ||||||||| | ||| ||||||||
Sbjct: 432 ttaaagtttcacttgaatcatcacactctcatcctccttcccaagcttcacttccttcta 491
Query: 341 ctcattcacattcaccaaattct 363
||||||||| || ||||| ||||
Sbjct: 492 ctcattcaccttaaccaacttct 514
Score = 52.0 bits (26), Expect = 3e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 102 taatacatctcatattcctctttctaagtctgtagacatgttaaatttcatgagtcccaa 161
|||| |||||| |||||| || |||| ||| ||||||||||||||||| | ||||| ||
Sbjct: 256 taattcatctcctattccactagctaaatctctagacatgttaaatttctttagtccaaa 315
Query: 162 catccttctttcatcacttcac 183
| |||||||||||||||||
Sbjct: 316 tttaattctttcatcacttcac 337
>gnl|LJGI|TC78456 similar to UniRef100_A7QE22 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 709
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 102 taatacatctcatattcctctttctaagtctgtagacatgttaaatttcatgagtcccaa 161
|||| |||||| |||||| || |||| ||| ||||||||||||||||| | ||||| ||
Sbjct: 694 taattcatctcctattccactagctaaatctctagacatgttaaatttctttagtccaaa 635
Query: 162 catccttctttcatcacttcac 183
|| |||||||||||||||||
Sbjct: 634 tttcattctttcatcacttcac 613
>gnl|LJGI|BP041637
Length = 457
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 318 ttcccatggttctattccttctcctcattcacattcacc 356
|||||||||||| |||||||||||||||||| ||||||
Sbjct: 355 ttcccatggttcacttccttctcctcattcaccttcacc 393
>gnl|LJGI|DC593665 homologue to UniRef100_A9B8F4 Cluster: Undecaprenyl-phosphate
galactose phosphotransferase precursor; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep:
Undecaprenyl-phosphate galactose phosphotransferase
precursor - Herpetosiphon aurantiacus ATCC 23779,
partial (6%)
Length = 482
Score = 52.0 bits (26), Expect = 3e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 102 taatacatctcatattcctctttctaagtctgtagacatgttaaatttcatgagtcc 158
|||| ||||||||||||| |||| ||| ||| || ||||||||||||||||||||
Sbjct: 211 taatccatctcatattccactttataattctntaaggatgttaaatttcatgagtcc 155