Miyakogusa Predicted Gene

Lj1g3v2581180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2581180.1 Non Chatacterized Hit- tr|I1NFB8|I1NFB8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,29.31,1e-18,PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.29212.1
         (1245 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP039174 weakly similar to UniRef100_A7PYA1 Cluster: Ch...   841   0.0  
gnl|LJGI|GO023342 similar to UniRef100_A7PYA1 Cluster: Chromosom...   694   0.0  

>gnl|LJGI|BP039174 weakly similar to UniRef100_A7PYA1 Cluster: Chromosome chr15
            scaffold_37, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (40%)
          Length = 564

 Score =  841 bits (424), Expect = 0.0
 Identities = 424/424 (100%)
 Strand = Plus / Minus

                                                                        
Query: 822  tggcagcgaggtttacaaagcattactcagagcgtactcaaggattggtaacgctgaagg 881
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564  tggcagcgaggtttacaaagcattactcagagcgtactcaaggattggtaacgctgaagg 505

                                                                        
Query: 882  tgcccaaagggtgtttgatgcgattcagctggctggtatcatcccagacgataagatttg 941
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504  tgcccaaagggtgtttgatgcgattcagctggctggtatcatcccagacgataagatttg 445

                                                                        
Query: 942  tggtcttgttatcaaggcctatggtatggctgggcaaagtgagaaggctcgcattgcgtt 1001
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444  tggtcttgttatcaaggcctatggtatggctgggcaaagtgagaaggctcgcattgcgtt 385

                                                                        
Query: 1002 tgaaaacatgaaaagagcaggtattgaacctactgatagatgcatcggttcggtgctggt 1061
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384  tgaaaacatgaaaagagcaggtattgaacctactgatagatgcatcggttcggtgctggt 325

                                                                        
Query: 1062 tgcttatgagaaggaaagcaagctaaatacagcactggaatttctgatagatttggagaa 1121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324  tgcttatgagaaggaaagcaagctaaatacagcactggaatttctgatagatttggagaa 265

                                                                        
Query: 1122 agagggcattatggttggggaagaagcttctgcaatattggcaggatggttccggaaact 1181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264  agagggcattatggttggggaagaagcttctgcaatattggcaggatggttccggaaact 205

                                                                        
Query: 1182 aggggtggtggaagaggtggagcttgttttaagagatttttccactactcgcgaggtcag 1241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204  aggggtggtggaagaggtggagcttgttttaagagatttttccactactcgcgaggtcag 145

                
Query: 1242 ttaa 1245
            ||||
Sbjct: 144  ttaa 141


>gnl|LJGI|GO023342 similar to UniRef100_A7PYA1 Cluster: Chromosome chr15 scaffold_37,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_37, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 663

 Score =  694 bits (350), Expect = 0.0
 Identities = 350/350 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggggacctgttgctataacctactaagcaacctttactacccaccctacttaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atgatggggacctgttgctataacctactaagcaacctttactacccaccctacttaatt 373

                                                                       
Query: 61  accaatagtattaccaaattttgtcgtgttcagacaagaggaaactcattataccaaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 accaatagtattaccaaattttgtcgtgttcagacaagaggaaactcattataccaaaag 433

                                                                       
Query: 121 cccagtaatttagatctccatagacaccgttttgattcagcattagttggtattggaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cccagtaatttagatctccatagacaccgttttgattcagcattagttggtattggaatg 493

                                                                       
Query: 181 gaggaaattgtaaaagaagaagtgaaagatgaaaaccacagaaggtttaggtggactgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gaggaaattgtaaaagaagaagtgaaagatgaaaaccacagaaggtttaggtggactgag 553

                                                                       
Query: 241 ataggccacaatatcacacacgaacaaaatgaggccatatcgaaacttcctttcaagatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ataggccacaatatcacacacgaacaaaatgaggccatatcgaaacttcctttcaagatg 613

                                                             
Query: 301 accaagcgatgtaaagccttgatgagacagatcatatgcttttccgcgga 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 accaagcgatgtaaagccttgatgagacagatcatatgcttttccgcgga 663