Miyakogusa Predicted Gene

Lj1g3v2580950.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2580950.2 CUFF.29231.2
         (176 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82231 homologue to UniRef100_A7PUI9 Cluster: Histone ...   256   4e-68

>gnl|LJGI|TC82231 homologue to UniRef100_A7PUI9 Cluster: Histone H2A; n=1; Vitis
           vinifera|Rep: Histone H2A - Vitis vinifera (Grape),
           partial (25%)
          Length = 458

 Score =  256 bits (129), Expect = 4e-68
 Identities = 132/133 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaataatggcaagaaatttatagtgattgcttttgtagaaattgggaaggggagtcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgaataatggcaagaaatttatagtgattgcttttgtagaaattgggaaggggagtcat 385

                                                                       
Query: 61  ggtctctcaaatacctgggtgagggacagaattttctgtgctgctcgtgttcttatctct 120
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 386 ggtctctcaaatacctgggtgagggacagaattttctgtgctactcgtgttcttatctct 445

                        
Query: 121 gttttgtatcaga 133
           |||||||||||||
Sbjct: 446 gttttgtatcaga 458