Miyakogusa Predicted Gene

Lj1g3v2580890.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2580890.1 Non Chatacterized Hit- tr|I1N3E7|I1N3E7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55804
PE,84.62,0,WD-REPEAT PROTEIN,NULL; WD40 REPEAT PROTEIN,NULL;
WD_REPEATS_2,WD40 repeat; WD_REPEATS_REGION,WD40-r,CUFF.29233.1
         (1293 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72484 similar to UniRef100_O81310 Cluster: F6N15.8 pr...   708   0.0  

>gnl|LJGI|TC72484 similar to UniRef100_O81310 Cluster: F6N15.8 protein; n=1;
           Arabidopsis thaliana|Rep: F6N15.8 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (15%)
          Length = 486

 Score =  708 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgcagtgttacccgttgtggcggtgtcgcttcttctaggcgccatcatcgctctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggacgcagtgttacccgttgtggcggtgtcgcttcttctaggcgccatcatcgctctc 189

                                                                       
Query: 61  gctttcttcaactcctacttccgccaccgccaatcggaggtccgatccatcgcgaatccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gctttcttcaactcctacttccgccaccgccaatcggaggtccgatccatcgcgaatccg 249

                                                                       
Query: 121 gatcccaaacccgtttccaaaccccttcctccgaagaagtctcaccctaaaccccattct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gatcccaaacccgtttccaaaccccttcctccgaagaagtctcaccctaaaccccattct 309

                                                                       
Query: 181 tctgacaaggatcaaatcaagcggcatcatccgttggatctgaataccttgaaaggccat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tctgacaaggatcaaatcaagcggcatcatccgttggatctgaataccttgaaaggccat 369

                                                                       
Query: 241 ggtgatgcagttacagggatatgcttctcccctgatggacagaatttggcaacagcttgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ggtgatgcagttacagggatatgcttctcccctgatggacagaatttggcaacagcttgt 429

                                                                    
Query: 301 gctgatggaatagtgagagtgtttaagttggatgatgcttcaagtaaaagtttcagg 357
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gctgatggaatagtgagagtgtttaagttggatgatgcttcaagtaaaagtttcagg 486