Miyakogusa Predicted Gene
- Lj1g3v2580600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2580600.1 tr|A2Q3V8|A2Q3V8_MEDTR Flagellar basal body rod
protein; GRAS transcription factor OS=Medicago
trunc,68.62,0,GRAS,Transcription factor GRAS; seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.29159.1
(2457 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318476 similar to UniRef100_Q9AVK4 Cluster: SCARECROW... 462 e-129
gnl|LJGI|TC78237 145 2e-33
>gnl|LJGI|FS318476 similar to UniRef100_Q9AVK4 Cluster: SCARECROW; n=1; Pisum
sativum|Rep: SCARECROW - Pisum sativum (Garden pea),
partial (8%)
Length = 610
Score = 462 bits (233), Expect = e-129
Identities = 233/233 (100%)
Strand = Plus / Plus
Query: 76 tgtggaagtagctcaaactccagcaacatgagcagtgaagaacaacaacacaccctgctt 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtggaagtagctcaaactccagcaacatgagcagtgaagaacaacaacacaccctgctt 60
Query: 136 caaaccatgccacagcctcattctgagaggaaaatggtgagaaaaagaatggcctcagaa 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaccatgccacagcctcattctgagaggaaaatggtgagaaaaagaatggcctcagaa 120
Query: 196 atggaacttcatcacaacaacaacaatatcaacaactcaaccgccactaggttctctagg 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggaacttcatcacaacaacaacaatatcaacaactcaaccgccactaggttctctagg 180
Query: 256 agaagcagcaccaacatgtcctctatgaattgttctttaccagccacagaaaa 308
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaagcagcaccaacatgtcctctatgaattgttctttaccagccacagaaaa 233
Score = 389 bits (196), Expect = e-107
Identities = 196/196 (100%)
Strand = Plus / Plus
Query: 427 ggtcttagtcatagtagtactttgtcaagagataacgttgctgctgctattcaaattcca 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ggtcttagtcatagtagtactttgtcaagagataacgttgctgctgctattcaaattcca 411
Query: 487 aattaccccactgtgaccgtcacaaccaactactccactatgcttctaccttcttccatt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aattaccccactgtgaccgtcacaaccaactactccactatgcttctaccttcttccatt 471
Query: 547 gtcaattcctctgcctcctccattccctcttccaccaccattgcttctccaaactaccat 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtcaattcctctgcctcctccattccctcttccaccaccattgcttctccaaactaccat 531
Query: 607 ttccaaggactagttg 622
||||||||||||||||
Sbjct: 532 ttccaaggactagttg 547
Score = 54.0 bits (27), Expect = 4e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 659 ctgtgcctcaagtttgtggattctctg 685
|||||||||||||||||||||||||||
Sbjct: 584 ctgtgcctcaagtttgtggattctctg 610
>gnl|LJGI|TC78237
Length = 543
Score = 145 bits (73), Expect = 2e-33
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 2385 gaaagacctttgcttgctcactgcttcagcttggagacctcccttcactgccattcccca 2444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaagacctttgcttgctcactgcttcagcttggagacctcccttcactgccattcccca 60
Query: 2445 tcatcataactag 2457
|||||||||||||
Sbjct: 61 tcatcataactag 73