Miyakogusa Predicted Gene

Lj1g3v2546310.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2546310.2 tr|Q0DH96|Q0DH96_ORYSJ Os05g0481700 protein
OS=Oryza sativa subsp. japonica GN=Os05g0481700 PE=4
SV=,79.17,0.00000000000004,seg,NULL; coiled-coil,NULL;
UNCHARACTERIZED,NULL,CUFF.29145.2
         (1146 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV428269 similar to UniRef100_A7NXY6 Cluster: Chromosom...    58   1e-07

>gnl|LJGI|AV428269 similar to UniRef100_A7NXY6 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 404

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 107/133 (80%)
 Strand = Plus / Plus

                                                                       
Query: 574 caactcaaggcatctcgagacgtggcgatggcaacagctgctaaagcgaaactactactt 633
           ||||| ||||||||||| ||||| || |||||||  ||||| ||||| ||| |||| |||
Sbjct: 175 caactgaaggcatctcgcgacgttgcaatggcaatggctgccaaagctaaattacttctt 234

                                                                       
Query: 634 cgtgagctaaaaacagttaaagcagatcttgctttcgctaaagcacggtgtgctcaactt 693
           || ||| |||| || || ||||| ||||| ||||| || || |  || |||||||| || 
Sbjct: 235 cgggagttaaagaccgtcaaagctgatctagcttttgcaaaggatcgatgtgctcagcta 294

                        
Query: 694 gaagaagaaaata 706
           || ||||||||||
Sbjct: 295 gaggaagaaaata 307